Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0019 ATGGAGTGCGAAGCTGCTTTCAAAACCAGTTCTGGCGGAGACGCCACCTTCAAATTCAGCCCCCAGGCGTTTCTCGAGGAGTTGTCCGCATTCGATGTGAAGAGTCTCGCCCCTTCCGACGACTTCTTTGTGGACGACCTTCTTGACTTCTCCCACCAAGACGCCCTCCCCGAACAACCAGACGAACCGCAACTGCCCCAGCATGATTCTGTTTCTGTTTCTCCTCGCCCGCACCACCAAACTCCTCACACTCTTTCTGCCAAAGACGAATTCTCCTCCGGCGAACTCATCCTTCCGGCGGATGATGAAGCACACTTGGAGTGGTTGTCTCATTTCGTCGAGGATTCCTTCTTGGAATGCTCCGCCGCATACCCCACCCGAACTTTAAAGGAAACTCCGAAGACCAAGACAGAGAAACCACTTGAATCCGAAACCCCCGTCGTGGCCTCGCCCTGTTTCCTCACTCCGGTTCCCGCCAAAGCCAGAAGCAAAAGAACACGAACCGGAGTTCGGGTAGGTGGCACTGGTTTGTAA 534 0.5449 MECEAAFKTSSGGDATFKFSPQAFLEELSAFDVKSLAPSDDFFVDDLLDFSHQDALPEQPDEPQLPQHDSVSVSPRPHHQTPHTLSAKDEFSSGELILPADDEAHLEWLSHFVEDSFLECSAAYPTRTLKETPKTKTEKPLESETPVVASPCFLTPVPAKARSKRTRTGVRVGGTGL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0019 177 MobiDBLite consensus disorder prediction 54 92 - -
Lele53g0019 177 MobiDBLite consensus disorder prediction 65 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0019 Lele-ChrLele53 196833 198078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0019 4 172 C2C2-Gata Transcription Factor Family AT5G66320 39.326 2.10e-19 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0019 53 196833 198078 Lele54g0018 54 209486 210682 ECH
Lele53g0019 53 196833 198078 Lele53g0019 53 196833 198078 ECH
Lele53g0019 53 196833 198078 Lele55g1475 55 20880873 20882101 hybridization
Lele53g0019 53 196833 198078 Lele56g1408 56 17134938 17137001 hybridization