Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0017 ATGTGTACAGATATGACACGTGATATCTCCCTCCCCTTAGCAACACTCAAAGTTGCAACACCAAAACCCTTACGCATGGATTCTCTTCCCATGGCATTCTTCTTCTTCATCCCCCTCTTCTTACTTCTCGGTTTTCTCCCTCGATTTCGCCGGCGTTCCCCCTTCCCGCCGGGGCCAAAAGGCCTTCCCATCATAGGCAACATGTCGATGATGGACCAGCTCACCCACAGAGGTCTGGCCAAGCTCGCCTCCCAATACGGCGGCGTTTTCCACCTCAAAATGGGCTTCCTCAACATGGTCGCCATCTCCGACCCTGACGCCGCTCGTCAAGTCCTTCAGCTCCACGACAACATATTCTCCAACCGACCCGCCACCATAGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCTAACTACGGCCCCTTCTGGCGCCAGATGCGTAAGCTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGGGCGGAGTCCTGGCAGTCCGTGCGAGACGAAGTGGACACGGTGGTGCGCACCGTGGCGAGTAACATCGGGAAGCCGGTGAATATCGGCGAGCTGGTGTTTTCGCTGACAAAGAATATAATATATAGGGCGGCGTTTGGGTCGAGTTCGCAGGAAGGACAGGACGAGTTCATAGGGATATTGCAAGAGTTCTCAAAGTTGTTCGGAGCGTTCAACATAGCGGACTTCATCCCTTACCTGGGGTGGATTGACCCGCAGGGGCTGAACACCAGACTGGCCAAGGCACGTGAGTCTCTGGACGGATTCATAGACAAAATCATCGACGAGCATATCCATAAAAAGAGGGATAAGAGCGATGAGGAGACGGACATGGTGGATGAGTTGATGGCTTTTTACAGTGACGAAGCTACAGTCTCCGAGTCTGAGGATCTCCAGAACTCCATCAAACTCACCAAGGATAACATCAAAGCCATCATCATGGACGTGATGTTTGGTGGGACAGAGACGGTGGCGTCGGCGATAGAGTGGGCAATGGCGGAGCTAATAAGAAACCCAGAAGATCTAAAGCGGGTCCAACAAGAGCTTGCTGACGTGGTGGGCTTGGATCGCAGAGTTGAAGAGTCCGACTTCGACAAGCTCACCTTCCTCAAATGCGCCCTCAAGGAGACCCTGCGCCTCCACCCTCCCATCCCGCTGCTCCTCCATGAGACGGCGGAAGACGCCGAGGTTTCCGGCTACTATGTCCCCAAGAAGTCGCGCGTCATGATCAACGCGTGGGCTATCGGGAGGGACAAGAACTCTTGGGACGACCCGGACACCTTTAAGCCTTCCCGCTTTTCGAAACAGGGCGTGCCCGATTTTAAGGGGAGCAACTTTGAGTTCATTCCGTTTGGGTCGGGTCGGAGGTCATGCCCCGGGATGCAGCTCGGACTCTACGCGCTGGACATGGCTGTAGCTCACCTACTTCATTGCTTCGCATGGGAATTGCCGGACGGGATGAAGCCGAGCGAGATGGATATGAACGACGTGTTCGGACTCACCGCTCCCAGAGCGAGTCGACTCGTTGCCATTCCCAGTAAGCGCGTGGTGTGCAATCTCTTTTAG 1590 0.5516 MCTDMTRDISLPLATLKVATPKPLRMDSLPMAFFFFIPLFLLLGFLPRFRRRSPFPPGPKGLPIIGNMSMMDQLTHRGLAKLASQYGGVFHLKMGFLNMVAISDPDAARQVLQLHDNIFSNRPATIAISYLTYDRADMAFANYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTVVRTVASNIGKPVNIGELVFSLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGWIDPQGLNTRLAKARESLDGFIDKIIDEHIHKKRDKSDEETDMVDELMAFYSDEATVSESEDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELIRNPEDLKRVQQELADVVGLDRRVEESDFDKLTFLKCALKETLRLHPPIPLLLHETAEDAEVSGYYVPKKSRVMINAWAIGRDKNSWDDPDTFKPSRFSKQGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDMAVAHLLHCFAWELPDGMKPSEMDMNDVFGLTAPRASRLVAIPSKRVVCNLF 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0017 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lele53g0017 529 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PANTHER CYTOCHROME P450 84A1-RELATED 30 528 - -
Lele53g0017 529 Pfam Cytochrome P450 56 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 SUPERFAMILY Cytochrome P450 56 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele53g0017 529 FunFam Cytochrome P450 84A1 48 522 - -
Lele53g0017 529 Gene3D Cytochrome P450 49 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0017 Lele-ChrLele53 181836 185003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0017 63 528 Monolignol Biosynthesis Gene Families AT4G36220 76.956 0.0 775