Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1744 ATGTCTAACTCTGACGGAACTAACACCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAGCAGCAGCAGTTGTCCTCCGGAAACGGCGCTCTCGCCGTTAAGAAGCCACCGTCTAAGGACCGTCACAGTAAGGTCGACGGCCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTGGGTCACAAATCGGACGGTCAAACCATCGAGTGGCTCCTACGCCAGGCCGAACCCTCCATCATAGCCGCCACAGGCACCGGCACTACTCCTGCGAGCTTCTCCACCGTTTCGGTCTCTTTACGCGGAGGCGGCGGAGGAGGAGGTTCGAACTCGCTGTCGTCGTCTTCTACCACTTCTACGTCTCTTGACCATAAGCCTGCCCTGCTGGGTCCGACACCCTTCATACTCGGAAAGCGCATACGGACCACCGATGATGACGCTGCTAAGGATGATGGCGTCTCCGTGGGACCCACTGTTGGGTCAATAGTGGGGCCGGCTGCACCAGCTGGGTTGTGGGCACTTCCGGCCAGGCCTGACTTCGGCCAGGTATGGAGCTTTGCTGCAGCTGCGGCCGCTCCTCCGCCAGAGATGGTGGTGCAGCCGGTGGGTGTGTCGGTGTCGCAACAGCAGCATGCTTCATTATTCGTCCATCATCAACAAGCCATGGGCGAGGCGTCGGCGGCTAGACTGGGTAATTACCTTCCAGGACATCTGAATTTGCTGGCTTCGTTGTCAGGTGGGCCCGGAAGTTCAGGTCTGAGAGATGACGAGCCTCGATAA 813 0.5916 MSNSDGTNTNGNGAIIDPQRQQQQQLSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSLRGGGGGGGSNSLSSSSTTSTSLDHKPALLGPTPFILGKRIRTTDDDAAKDDGVSVGPTVGSIVGPAAPAGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPVGVSVSQQQHASLFVHHQQAMGEASAARLGNYLPGHLNLLASLSGGPGSSGLRDDEPR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1744 270 MobiDBLite consensus disorder prediction 95 135 - -
Lele52g1744 270 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 242 IPR005333 GO:0003700
Lele52g1744 270 ProSiteProfiles TCP domain profile. 40 94 IPR017887 -
Lele52g1744 270 MobiDBLite consensus disorder prediction 37 52 - -
Lele52g1744 270 Pfam TCP family transcription factor 40 116 IPR017887 -
Lele52g1744 270 MobiDBLite consensus disorder prediction 1 52 - -
Lele52g1744 270 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1744 Lele-ChrLele52 20932546 20933358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1744 5 270 TCP Transcription Factor Family AT5G23280 60.294 3.05e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele52g1744 TCP 1e-31 No_clan