Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1739 ATGGCTTCTACTATGGCCATGGTTTTGAAGTCAATGGCCGCGACAACCGGCGATCTATGTCTCTTTAGTCACTTTGCTGTGAATGAAAACCCGAAAGTCCATTTCAGAACTCAGGATTTTGGTGCCAGAGCTGTAAATCGAGGGTTTTGTACTTATATAAAGACATTGAAGAGAAGGCTGGGGATCAAGGTACGTGCGGTTGTGCAAGAGAATCTTGAGGCATCAAAGAGGAGTAATGCTTGTCCTCTTGGTCTGGACGTGGTTTCAGAAGGGGAGTTAAGGGAGAAGGGGTTTATGGGGTTGAGGAAGACGAAGTTAGTATGCACAATTGGGCCCGTATGTTGGGCATTGGAGGATTTGGAGAAGTTGGCTTTGGGAGGAATGAATGTTGCTAGGCTCAACATGTGCCATGGGACCAGGGAGTGGCACTTGGATGTCCTTGCGAAGATCAAGAAGTTAAATCGGGAAAGAAATTTTTCTATCTCTGTGATGATTGATACTGAGGGTAGTCAAATTCATGTTGTTGATCATGGGGCTCCTTCCTCTGTTAAAGTAGAGGATGGTTCGATTTGGGTTTTTACTGCTGAACAGTCTAAGAGTTACCGTCCATTCACCGTTCAAGCAAACTTTGAAGGTTTTGCCGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTTGTTGAAAAGACTGGATGTGATTTGCGTTGTAAGTGCACAGATCCTGGTCTTTTCCTACCTGGAGCCAAATTTAGCTTCTGGAGAAATGGAAAGCTTGTGAGGAGGAGTCATAAGCTCTCAACTCTATCAACAAAGGATTGGGCTGACATTGATTTTGGGATCTCTGCGGAAGTTGATTGTTTTGCCCTGTCCTTTGTCAATGATGCGGATTCTATCAAGCATTTAAAGAAATACCTGTCTACCAAAACTGCCAAACCTATTAAGGTATTAGCAAAGATAGAGAGCCTGGAATCCCTTTATAACCTAGAGGATATAGTGCAAGCTTCTGATGGAATCATGGTGGCTCGGGGCGACCTTGGGGTGGAGACACCACTTGAACAGATTCCTATAGTCCAAGAGAGTATAACTTACATTAGCAGACAACTTAACAAGCCAGTAATTGTAGCTTCTCAACTTCTTGAGTCAATGGTTGAATATCCAACTCCAACACGTGCTGAGGTTGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCCTTGATGTTATCCGGTGAGTCAGCTATTGGTTCATATGGACAGAAGGCTCTAGCAGTTCTTGATACGGCTAGCAGCAGAATGGAATCATGGAGTCGGGCAGAGAACAGACAGACTCATCTCAATACCCATCAACTTGGGCTATCATTACCAGATCGTATCGCAGAGCAGATATGCAATTGTGCGGTTGAGATGGCCAACAACCTTGGCGTGGACGCTATTTTTGTGTTCACAAAGCATGGATACATGGCATCTCTCTTATCACGTAACCGTCCAAATCCTCCTATCTTTGCTTTCACCAGCGATCACAATACCCGTATGGCTCTGAATGTGCAATGGGGAGTTGTTCCTCTCCTTGTTGATTTATCAGATGATGCAGAATCTAACATCTCAAAATCCGTTGGGCTCATGAAATCCAGAGGATTGATCAGGCAAGGAGATATTGTTCTTGTGGTCTCCGATGTTACTCCAACACCTACAACTCCATTGTCTCTCCAGTCAATTCAAGTGAAGCAAAATGCCCTGGTAATTGTGCATCACCATTTTGCTGCTCAGTTAACTCAAAAGGCCAGTAAACAAAGGATGGAGCAGATCATTGAAAGATACCAGAAAGCTACGGGAGTACGCATACCTGAACATGATAGTCGGGAGACTCTGCTTCTGGAACTGGGAATTCAAAGGTACATTGGGGACAGCATGGGAACTCTACAGTACGAGGAACTGACAAAACTGGAACATGACCTGGAGATATCTGTCACCAAGGTCCGAAATCGCAAGAATGATCTGTTGCAACAGCAGCTGGATAATCTGCGAAGAAAGGAAAGAATGATGGAAGAAGAGAACAGCTATCTGGCGCATTGGATTGAGGAGCAGCGAGGAGTGATATCAATGGAGAATCATGATGATGAGCAAATGGATCAGTTGCCATTCTACGACGGCCAAACGTCTCTCCACCTTCATCCCTATCTCCAGCTTGCTCAGCCCATTCATCCCCATTGA 2238 0.4468 MASTMAMVLKSMAATTGDLCLFSHFAVNENPKVHFRTQDFGARAVNRGFCTYIKTLKRRLGIKVRAVVQENLEASKRSNACPLGLDVVSEGELREKGFMGLRKTKLVCTIGPVCWALEDLEKLALGGMNVARLNMCHGTREWHLDVLAKIKKLNRERNFSISVMIDTEGSQIHVVDHGAPSSVKVEDGSIWVFTAEQSKSYRPFTVQANFEGFAEGIEVGDELVIDGGMACFVVVEKTGCDLRCKCTDPGLFLPGAKFSFWRNGKLVRRSHKLSTLSTKDWADIDFGISAEVDCFALSFVNDADSIKHLKKYLSTKTAKPIKVLAKIESLESLYNLEDIVQASDGIMVARGDLGVETPLEQIPIVQESITYISRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLDTASSRMESWSRAENRQTHLNTHQLGLSLPDRIAEQICNCAVEMANNLGVDAIFVFTKHGYMASLLSRNRPNPPIFAFTSDHNTRMALNVQWGVVPLLVDLSDDAESNISKSVGLMKSRGLIRQGDIVLVVSDVTPTPTTPLSLQSIQVKQNALVIVHHHFAAQLTQKASKQRMEQIIERYQKATGVRIPEHDSRETLLLELGIQRYIGDSMGTLQYEELTKLEHDLEISVTKVRNRKNDLLQQQLDNLRRKERMMEEENSYLAHWIEEQRGVISMENHDDEQMDQLPFYDGQTSLHLHPYLQLAQPIHPH 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1739 745 Pfam K-box region 633 701 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele52g1739 745 PANTHER PYRUVATE KINASE 83 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 FunFam Pyruvate kinase 275 441 - -
Lele52g1739 745 Gene3D - 104 435 IPR040442 -
Lele52g1739 745 PRINTS Pyruvate kinase family signature 323 349 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 292 306 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 400 418 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 350 374 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 375 399 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 419 435 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 PRINTS Pyruvate kinase family signature 159 175 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 ProSiteProfiles K-box domain profile. 617 707 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele52g1739 745 SUPERFAMILY PK C-terminal domain-like 463 571 IPR036918 -
Lele52g1739 745 TIGRFAM pyruv_kin: pyruvate kinase 102 570 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 ProSitePatterns Pyruvate kinase active site signature. 321 333 IPR018209 GO:0004743|GO:0006096
Lele52g1739 745 Gene3D - 171 273 IPR015806 GO:0004743|GO:0006096
Lele52g1739 745 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 444 IPR015813 GO:0003824
Lele52g1739 745 FunFam Pyruvate kinase 437 577 - -
Lele52g1739 745 Pfam Pyruvate kinase, alpha/beta domain 469 568 IPR015795 -
Lele52g1739 745 SUPERFAMILY PK beta-barrel domain-like 172 256 IPR011037 -
Lele52g1739 745 Coils Coil 673 693 - -
Lele52g1739 745 Pfam Pyruvate kinase, barrel domain 102 442 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele52g1739 745 Gene3D - 436 583 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1739 Lele-ChrLele52 20872885 20879644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1739 596 711 MADS-box Gene Family AT5G23260 39.231 3.23e-20 89.7