Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1732 ATGATTTTACAATCTGCTTCTGCTAGCTTTGAATTCTCGCAGATATTTCCTTACGTTTGCCCATGTAGTAACTTGGGTGAGATTAATGGTTCAAGGAACCGGAGTTTTCTAACGGTTCCTATGTCTAGAAGATGGAGGAAAGGATTGATTGCCAATTCAGGGTATCGAAAATTTCGAAGGAAATGGGAATTTCGCTTGTGCGCAATGCCTACAGATGGTTCTAACCGAAATGGAAACTGGAATGCAGAATTCGCTGATTCTACAAGACGGGTTGCAAAAACTTTCGTCTTGAAACGAATTTCTAATGAATTGGAGGGGGATGAATTGTCGCAAGAATCGCCAATTCAGTTGAGCTCGAACTTTACCAATTTCCAAGAAGACCCTATTGTAGATAAGCTAAGAACCCAACTGGGAGTGATACATCCGATACCATCGCCACCAATTAACCGCAACGTGGTTGGTTTGTTTGTATTCTTTTTCTTTGTCGGGGTTGCTTTTGATAAACTGTGGACCTCAAGGAGGAGAAGCAAAGTCGGTAGTGTAGACACCCGTCGTGGTGTGTGGCCACAGGTGCCCACCAGCTTTTCATTGTTTCTAGAGAAGGATTTGCAGAGAAAAGAGTCAGTTGAATGGGTGAACATGGTGTTGGTGAAGTTATGGAAGGTCTACAGAGCTGGGATTGAAAATTGGATCATCGGATTGCTTCAGCCTGTTATCGACAACTTAAAGAAGCCTGATTATGTGGAAAGGGTTGAGATAAAGCAATTCTCTCTGGGGGATGAGCCATTGTCAGTTAGAAATGTGGAGCGAAGGACTTCTCGCCGGGCAAATGATTTGCAGTACCAAATAGGCCTTAGGTATACTGGTGGCGCTCGCATGCTGCTGATGCTTTCACTTAAATTTGGCATTATCCCAATTGTTGTGCCCGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTATGGGTAAAATTGCGACTGATCCCAACGGAGCCTTGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAATTGTCACCATTCCGTTTATTCAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACAAAACTCCTCACTGAAGATTTACCTCGGTTATTTGTACGTCCAAAGAACATCGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTGCTGGTGATTTAAAATCTGGAGAATTGCAAGATGGAAACAAGGATTTTGTTGGTGAACTATCCGTCACTCTTGTTGATGCTAGAAAGCTTTCTTATTTTTTCTATGGAAAGACAGATCCGTATGTTATTCTTACCCTTGGAGATCAAACTATTCGCAGCAAAAAGAACAGTCAAACTACTGTGTTTGGTCCCCCTGGTATGCCAATTTGGAACCAGGATTTTCATATGCTGGTCACTAACCCTAAAAAGCAGAAGTTACACATCCAAGTAAAGGATTCGTTGGGATTTATGGATTTGACTACAGGCACTGGGGAGATTGATCTGGGTTCTCTCCAAGACACTGTACCAACAGACCGGGTTGTGGTTTTGCAAGGAGGTTGGGGGATTTTGGGAAAGGGCTCTTCTGGGGAGATATTGCTACGACTAACTTATAAAGCATATGTGGAGGATGAGGAAGACGACAAGACCAACTCCATTGATACAGATGCTTCAGATGATGAGTTGTCAGATTCAGAGGAATCAAGTGGTACTAATGAGAAGGGTGAAAGAGATGCTATGAGTGAAAGAGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGTGAAGAATTCCAAGGTATAGTAGCATCTGAAACAGGGCATGCCAAAACTTCAGATGACAGCTTAAGTACAGGGTCTAATGTTCCAAGGTCCAATCTTAATGTGGAATCAAACCCTTCAAATTCTTATAGTTCTGAAGGTTCTACAGGGTCAGCCTTATTCTGGTTTGCTGTGATTACTAGCGTATCAATCCTAATTGCTCTCAATATTGGAGGTTCAAGTATTTTCAATCCTTAA 2040 0.4201 MILQSASASFEFSQIFPYVCPCSNLGEINGSRNRSFLTVPMSRRWRKGLIANSGYRKFRRKWEFRLCAMPTDGSNRNGNWNAEFADSTRRVAKTFVLKRISNELEGDELSQESPIQLSSNFTNFQEDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVAFDKLWTSRRRSKVGSVDTRRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLVKLWKVYRAGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRANDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKNIVLDFQKGKAVGPVAGDLKSGELQDGNKDFVGELSVTLVDARKLSYFFYGKTDPYVILTLGDQTIRSKKNSQTTVFGPPGMPIWNQDFHMLVTNPKKQKLHIQVKDSLGFMDLTTGTGEIDLGSLQDTVPTDRVVVLQGGWGILGKGSSGEILLRLTYKAYVEDEEDDKTNSIDTDASDDELSDSEESSGTNEKGERDAMSERESFMDVLAALIVSEEFQGIVASETGHAKTSDDSLSTGSNVPRSNLNVESNPSNSYSSEGSTGSALFWFAVITSVSILIALNIGGSSIFNP 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1732 679 MobiDBLite consensus disorder prediction 551 587 - -
Lele52g1732 679 Pfam C2 domain 418 514 IPR000008 -
Lele52g1732 679 MobiDBLite consensus disorder prediction 553 572 - -
Lele52g1732 679 MobiDBLite consensus disorder prediction 612 645 - -
Lele52g1732 679 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 205 392 IPR031468 GO:0008289
Lele52g1732 679 MobiDBLite consensus disorder prediction 573 587 - -
Lele52g1732 679 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 55 679 - -
Lele52g1732 679 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 546 IPR035892 -
Lele52g1732 679 Gene3D C2 domain 406 547 IPR035892 -
Lele52g1732 679 ProSiteProfiles C2 domain profile. 405 521 IPR000008 -
Lele52g1732 679 SMART C2_3c 419 520 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1732 Lele-ChrLele52 20809496 20822386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1732 409 511 C2H2 Transcription Factor Family AT4G05330 33.654 4.36e-06 47.4