Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1725 ATGTCTCGGCAGCCTACAGCCCCCGCCTATCACAAATCGAAGACCCTCGACAATAAATATACTTTATTTGCTGAGTCTTGCTTTCTACGATCACTTCCAACTCTGATTATTTTTGCTCTTTTGATTTTTGCTTTCATGAGAAAATTTGAGCAGCTGCTGGGAGATGAAATTGGGAAAGGAGCATATGGTCGGGTTTACAAAGGTTTGGACTTGGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCCTTGGAGAATATTCCTCAGGAGGATCTCAACATCATCATGATTTTGAATCATAAGAACATTGTAAAATATCTCGGATCTTCAAAGACAAAGACTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCGAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTATTAGAAGGCTTGGTTTATCTACATGAACAAGGGGTAATCCATCGAGATATTAAAGGTGCAAACATATTGACAACTAAAGAGGGTCTCGTTAAACTTGCTGATTTTGGTGTAGCAACAAAATTGACTGAGGCTGATGTCAATACTCATTCCGTTGTTGGAACACCATATTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCCTCAGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGCGTGCCCCCTTATTTTGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCACTTCCAGATAGCTTGTCTCCTGACATCACTGATTTTTTGTGCCAATGCTTTAAGAAGGATGCTAGACAAAGGCCAGATGCTAAAACTTTGCTCTCTCATCCTTGGATAAAAAACAGTAGACGTGCTCTGCAGTCATCACTTCGTCAAAGCAGAACACTAAAGTAG 951 0.4069 MSRQPTAPAYHKSKTLDNKYTLFAESCFLRSLPTLIIFALLIFAFMRKFEQLLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIPQEDLNIIMILNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYFDLQPMPALFRIVQDEHPPLPDSLSPDITDFLCQCFKKDARQRPDAKTLLSHPWIKNSRRALQSSLRQSRTLK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1725 316 Coils Coil 305 316 - -
Lele52g1725 316 FunFam MAP3K epsilon protein kinase 1 48 316 - -
Lele52g1725 316 SUPERFAMILY Protein kinase-like (PK-like) 53 305 IPR011009 -
Lele52g1725 316 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Lele52g1725 316 SMART serkin_6 51 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1725 316 ProSiteProfiles Protein kinase domain profile. 51 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1725 316 CDD STKc_Cdc7_like 53 298 - -
Lele52g1725 316 PRINTS Tyrosine kinase catalytic domain signature 120 133 IPR001245 GO:0004672|GO:0006468
Lele52g1725 316 PRINTS Tyrosine kinase catalytic domain signature 224 246 IPR001245 GO:0004672|GO:0006468
Lele52g1725 316 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Lele52g1725 316 PRINTS Tyrosine kinase catalytic domain signature 158 176 IPR001245 GO:0004672|GO:0006468
Lele52g1725 316 PRINTS Tyrosine kinase catalytic domain signature 205 215 IPR001245 GO:0004672|GO:0006468
Lele52g1725 316 Pfam Protein kinase domain 55 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1725 316 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 49 311 - -
Lele52g1725 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lele52g1725 316 Gene3D Transferase(Phosphotransferase) domain 1 50 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1725 Lele-ChrLele52 20732903 20737268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1725 1 316 MAP Kinase Kinase Kinase AT3G13530 81.734 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lele52g1725 Pkinase 5.5e-67 CL0016