Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1722 ATGATGAGGGAGGAAGAGAAGGACGACGTTGGCAGAGCAGCTACTCTGACCGTGAGAGAGAGAGAGACAAAGATCCAGAGAAAATCAATGGGGAGTTGTGGAAGGGAAGGATCGGTGAGGCAGTATATACGATCCAAAGTCCCTCGTCTAAGATGGACTCCTGAACTTCATCGCTGCTTTGTTCATGCCATTGACACCCTCGGAGGTCATCACAAGGCGACGCCTAAGCTTGTTCTTCAGATGATGGATGTCAAAGGTCTCACTATTTCACACGTGAAGAGCCATCTCCAGATGTACAGAAGCATGAGAAGCAATTTGGGTAGACAAGATGGGAGTTCGAGCCACCATAGAAAACAATCTTTTCAGGAACATGATGATGTGTGTGTTGATGAAGTGACTGATGCGGATGCTGGTAGAGGTAGCATTATTCCACAATGCTCAAAATCCATGAGGAAAGAATCAGATTCCCCCAGGAGCTACAGTGATTTCTCACCTAAAAGAGCGAGAATGGAGACGAGGAGTTGCATAGCAGGAGCGGAGAGGCAAAGAACATGTAAGGCAGGAACGGTGACGAATCCGTACAGCTTTTATGATTATGTACAGGCAATGGGTGAGCGCAGGGGAATAAAGGAGGCTTCTCCTTCTTCCTCTTCTGCTGCTGCAACAACATCAATATGGCAGAATCATCCCTTCTCTCTTCTGCCACATTTTCCTAACCTCTCTTTCAGCCAACACTCCGATTTTCTTCAGGGTAGCGAATTAGTGAGCAGAAGAATCGTGGGTTCAGTGGCGAAGAATAAAGGAGGAGATGAAGGAGGCAGGGGGTGTGAGCTGTCACTATCTCTGTCACTGCCAAATCAGTCGGCAAAGAGGAGCAATACAATTACGAACAACAATTCATCAAGCAGTGAAGTGAGCGAAGCCATGTCATTCATATCTTGTTCTGCCTCCGGCAAAGATATTATTAACTTAGACTTGTCTATAGCCCTTTGTGGCAATTGA 1002 0.4651 MMREEEKDDVGRAATLTVRERETKIQRKSMGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIDTLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRSNLGRQDGSSSHHRKQSFQEHDDVCVDEVTDADAGRGSIIPQCSKSMRKESDSPRSYSDFSPKRARMETRSCIAGAERQRTCKAGTVTNPYSFYDYVQAMGERRGIKEASPSSSSAAATTSIWQNHPFSLLPHFPNLSFSQHSDFLQGSELVSRRIVGSVAKNKGGDEGGRGCELSLSLSLPNQSAKRSNTITNNNSSSSEVSEAMSFISCSASGKDIINLDLSIALCGN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1722 333 MobiDBLite consensus disorder prediction 110 126 - -
Lele52g1722 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 28 144 - -
Lele52g1722 333 FunFam Myb family transcription factor 46 104 - -
Lele52g1722 333 MobiDBLite consensus disorder prediction 147 167 - -
Lele52g1722 333 MobiDBLite consensus disorder prediction 105 126 - -
Lele52g1722 333 Gene3D - 47 104 - -
Lele52g1722 333 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
Lele52g1722 333 MobiDBLite consensus disorder prediction 151 167 - -
Lele52g1722 333 SUPERFAMILY Homeodomain-like 46 103 IPR009057 -
Lele52g1722 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Lele52g1722 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1722 Lele-ChrLele52 20714679 20718849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1722 30 106 G2-like Transcription Factor Family AT1G14600 73.171 1.61e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele52g1722 Myb_DNA-binding 3.9e-06 CL0123