Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1711 ATGGAGCTTCCTGCATTTACCAGCTTCGAGGCAATTTCTAAGGTTTCATTATGCCCATTTTCTTCCAAACAAGTTTTGTTTGGAAACACTGTTCGTTGCCGGAACATTAGGTTCCTATGGTGTCGAAATTCAAAATCTTTTGCTGCAATCACCATGACTTCAGACGAAGATTCCTTGTCAAATGATTATGGACTAAGACAGAGCCTTGGAACTAGATCTGGAGTTATCGACGTGATTGGCATTGGCAGCAGGAAGGATGCAGTTCTAGATTTCTGCTTAAAGTCGCCATTTCAGTTATCGTCGCTGCAATTCTGGAATATTCTTATGAAGGGATCTCAAGAGGTTCAGTTGCAACTAAGGTCTTATGAAGAAGATTCTCTTCCAAGAATTGTCAAAGCTTCATTATTTATGAAGTCATGCTCAAAGACTATTATTCTTGTAGCTAGTGCAGGATATGGATCAGACCACTCTGTTGCAGTTGATGTTTTCAAAACAATAAAGTCATCAAATGGATTAACTGTTGCTATTATCTTGAAGCCTTTTGTCTTTGAAGGGTTGAGGCGACGAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTATTGAAATTGATATCGATTCACTACTTAAAAAGGACTTGGTGACTCTAGATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGCTATATCCATTCTCAAATCAGAGATGCACAGGAAACTTATAGATGGTTTGCATGGCGGTGGCAAAAAAGAAGTCAGTAATTTGGAAATTAATAAAATATTTGAAAGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCAATTCTACAGTCTTTAATTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATAGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATCAATGAGAATGATATCACCGCATTTCTGCATACTTTCCGTCAAACAACGGGATACACAAAGGAAATTATAATATCTACAGACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACCACTGTTCTTGCACTGGGGATAAATATGCAACAATCTTCCCAGAGTGGTGGCATGCTTTCTAGACTTGCCCAGCATTTTCCTCTTCTTTTCAGCTTTTGGGGGAAATATCAACATCAACCAGCTGACACCAGGAAAGAGAATTCAACTGAAAGTATATCTCCTTCTCAAGCGGCTGAATCAGATGAATTTAATGATGGGGATAGAAATGCTTCTGATGTGATAGATGACAAGTTCAACAAGGATTTTGAATCTTTGGAGCCACTTGTGAGCAATAAAACTACAAAGTCAAACGAATCGAGGTGTTCTGAACAAAACAGAGAACAACAATTGGACAAAAGTTCTGAGTTTTCCAGCCTTGATGATGAAATTTCTAGAGGCGACTCTGCTTGTCGAAGGGAGAAGCTCTTAAATTGGAATCTTGGTCCTGGGCATGAGGTTGCACAGGAGTGGGCCAAACAAAGGGCAGCTGACGCTACTACTCCAACGGCTGACAGTGTTAGCATCTTTAACCTTCCTGTTGGCGTAAGATCTTCTGAACAGTTAAAAGACCGTTCAGAAGTCTCCATGGCACAAGAGCCAGCAACTGAAAATGATGTCAAAGTGCCTAATAAGATGCCTTGGAGTGCATTGACTGATTCAGGTCGGGAAGCAGTGATGGATTTTACATCTACACTTTTAAATGGAAAGCAAGCAGACAAATCAAACAAGCAAGGGGTTCTTTCTGCTCGAGCGGCATCCATGCTGGAAGCAGAACGTGATTCATCAAAGAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCGGAAGGGAAGGGGCGACTTGTCCTCGGGGATGGAAGTATATACGATGGTACATGGCGCTATGGTAAGAGATCAGGTCCTGGCACATTGTATTTCATCAACGGCGATGTGTTCCAAGGATCATGGAGGGACGATCTTATGCACGGGAAAGGCTGGTTTTATTTTCACACAGGGGATAGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGTGAAGGGCGTTTCTACACAAAGAATGGGGATGCCTTCTTTGGAAATTTTAAAGATGGATGGCGACACGGGCAATTTCTATGCATTAATGCTGAAGGAACAAGGTACATTGAGATTTGGGAATATGGCGTTATTGTAGAAAGCAAGCATTTAGACAAAGATGATGGAGAAGAATGA 2313 0.4081 MELPAFTSFEAISKVSLCPFSSKQVLFGNTVRCRNIRFLWCRNSKSFAAITMTSDEDSLSNDYGLRQSLGTRSGVIDVIGIGSRKDAVLDFCLKSPFQLSSLQFWNILMKGSQEVQLQLRSYEEDSLPRIVKASLFMKSCSKTIILVASAGYGSDHSVAVDVFKTIKSSNGLTVAIILKPFVFEGLRRRDEVKNLVEKLKENTDLLIEIDIDSLLKKDLVTLDEAMKTANDAVLLAINAISILKSEMHRKLIDGLHGGGKKEVSNLEINKIFESYKEARIGFGAAYNMKTSILQSLIDCPFLGVSLKDSNSMVICNLTSSVPINENDITAFLHTFRQTTGYTKEIIISTDHEPNLEPNLLITTVLALGINMQQSSQSGGMLSRLAQHFPLLFSFWGKYQHQPADTRKENSTESISPSQAAESDEFNDGDRNASDVIDDKFNKDFESLEPLVSNKTTKSNESRCSEQNREQQLDKSSEFSSLDDEISRGDSACRREKLLNWNLGPGHEVAQEWAKQRAADATTPTADSVSIFNLPVGVRSSEQLKDRSEVSMAQEPATENDVKVPNKMPWSALTDSGREAVMDFTSTLLNGKQADKSNKQGVLSARAASMLEAERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLVLGDGSIYDGTWRYGKRSGPGTLYFINGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKNGDAFFGNFKDGWRHGQFLCINAEGTRYIEIWEYGVIVESKHLDKDDGEE 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1711 770 MobiDBLite consensus disorder prediction 447 486 - -
Lele52g1711 770 MobiDBLite consensus disorder prediction 461 486 - -
Lele52g1711 770 Gene3D - 655 707 - -
Lele52g1711 770 Gene3D - 708 769 - -
Lele52g1711 770 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 101 766 - -
Lele52g1711 770 MobiDBLite consensus disorder prediction 403 434 - -
Lele52g1711 770 Gene3D Tubulin/FtsZ, GTPase domain 111 370 IPR036525 -
Lele52g1711 770 MobiDBLite consensus disorder prediction 542 568 - -
Lele52g1711 770 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 630 757 - -
Lele52g1711 770 MobiDBLite consensus disorder prediction 408 422 - -
Lele52g1711 770 Pfam MORN repeat 638 654 IPR003409 -
Lele52g1711 770 Pfam MORN repeat 706 723 IPR003409 -
Lele52g1711 770 Pfam MORN repeat 679 701 IPR003409 -
Lele52g1711 770 Pfam MORN repeat 656 678 IPR003409 -
Lele52g1711 770 SMART morn 631 652 IPR003409 -
Lele52g1711 770 SMART morn 723 744 IPR003409 -
Lele52g1711 770 SMART morn 677 698 IPR003409 -
Lele52g1711 770 SMART morn 654 675 IPR003409 -
Lele52g1711 770 SUPERFAMILY Tubulin nucleotide-binding domain-like 77 242 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1711 Lele-ChrLele52 20631778 20638393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1711 1 767 PP2C-type Phosphatase Gene Family AT1G75010 45.266 0.0 624