Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1702 ATGGCCGAAGAAGCTTCTACTTCGGCTTCTTCTTCGGAATTTGAGTCTAATCCAACTGATGCAGTAATATTTGTAGGAGTCAGCCTGGCTCTGGGAATTGCTAGTAGGCATATTTTGCGTGGGACCAGAGTCCCTTATACTGTTGCTCTTCTCATCATTGGCATTGGCCTTGGATCATTAGAATATGGTACTCATCATCAGCTGGGAAAGATTGGCAATGGAATTCGTATTTGGTCAAACATTGATCCAGATCTTCTGTTAGCTGTTTTCCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTCAATGGAAATTCACCAAATTAAGAGGTGTATTGTACAAATGATATTACTAGCTGGTCCAGGTGTTGTGATATCAACCTGCTGTCTTGGATCTGTTTTGAAGTTGACTTTTCCATATAATTGGAGTTGGAAAATATCACTATTGCTTGGGGGACTTCTAAGTGCAACTGATCCTGTAGCAGTTGTGGCTTTGTTGAAAGAGCTTGGTGCCAGCAAAAAATTGAGTACAATAATTGAAGGGGAATCCTTGATGAATGACGGAACGGCAATTGTGGTCTATACTCTATTTTTTCGGATGGTCCTTGGAGAGAGCTTCAACTGGGCATCCATAATGAAATTTCTAGCACAAGTTTCTCTTGGAGCTGTAGGTATGGGTCTTGCTTTTGGGATAGCATCTGTTTTGTGGCTTGGATTTATTTTTAATGATACAGTGATAGAGATCACTCTAACACTGGCTGTTAGCTATATTGCTTTCTACACTGCTCAAGAGGGTTCTGATCTTTCTGGTGTTTTGACGGTGATGACATTGGGGATGTTTTACTCTGCCTATGCGAGGACCGCTTTTAAGGGTGATGGACAACAAAGCTTGCATCACTTTTGGGAAATGGTTGCTTATATTGCTAATACATTAATTTTCATATTGAGTGGAGTTCTTATAGCTGAAGGCATCCTTAATGGTTACAATGTGTTTGCTGATGGAAAATCATGGGCCAACCTCTTTCTTCTCTATTCTTATGTTCAAGCGTCTAGGTGCATAGTAGTTGGGATACTTTTTCCCTTCCTACGTTACTTTGGATATGGTTTGGATTGGAAAGAAGCTGTAATTCTCATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGTCATTATCATTGTCAGTTAAGCGTTCCAGTGGCAGATCAATTGAATTGAATTCAGATACAGGAACACTGTTTCTATTCTTCACTGGTGGAATTGTGTTCTTGACTCTTATTGTGAATGGTTCGACCACACAGTTTATTTTACGCTTCCTTGACATGGATAGATTATCTGCAGCTAAGAAACGCATCCTTAATTATACAAAGTATGAAATGTTGAATAAAGCATTAGAGGCTTTTGGCGAGCTTGGAGATGATGAGGAACTGGGACCTGCTGACTGGCCTACTGTGAAGAGATATATCTCATGCTTAAATGACCTTGAAGGTGAACGCATTCATCCTCATGGCGCACCTGAAAATGACAGTACTCTGGATCCCATGAATTTGAAAGACATAAGAATACGCCTTTTGAATGGTGTCCAAGCTGCTTACTGGGAGATGCTTGATGAGGGAAGAATTGCGCAAACAACAGCTAATATCTTAATGAGGTCAGTGGAGGAAGCTATAGATTTCGCTCCACTTGAGCCTTTATGCGACTGGAGAGGCTTAAAACCTAACGTTCACTTCCCAAGTTACTACAAGTTCCTTCAGACTAGCATTTTTCCACGGAAATTAGTTACATATTTCACTGTGGAAAGATTGGAATCTGCATGCTGTATTTGTGCAGCTTTCCTTCGTGCCCATAGAATTGCTCGGCGACAGTTACATGACTTTATAGGTGACAGTGATGTTTCATCTATTGTCATCAATGAAAGCGTTGTAGAAGGAGAAGAAGCAAGAAAGTTCCTAGAAGATGTTCGTGTGGCATTCCCTCAGGTTCTGCGTGTTGTGAAAACAAGGCAAGCTACATATTTAGTGCTAAATCATTTACTTGAATATGTTCAAGACCTTGAAAAGTCAGGATTATTGGAGGAGAAAGAGATGCTGCATCTTCATGATGCTGTCCAGACTGATTTAAAGAAACTACTTAGGAATCCTCCCTTGGTGAAGGTTCCTAAAATGAGTGGTGTGCATCCTATGTTGGGTGCCCTGCCATCTTCTGTCCGTGAACCACTTGCAAGCAATAGCAAGGAAATGATGAAATTGCGTGGTCTGACACTTTACAAGGAAGGCTCCAAACCAAATGGTATTTGGTTGGTGTCTAGTGGGGTTGTGAAGTGGGAAAGCAAGATAATAAGAAACAAGCATTCCTTTTACCCCACTTTTACTCATGGAAGCACATTGGGTCTATACGAAGTCCTAACTGGAAGGCCATACATCTGTGATGTGATAACAGATTCGGTGGTTCTCTGTTTTTTCCTTGAAGGTGACAAGATATTGTCGTGTCTTAAGTCAGATCCTTCAGTTGAAGACTTCCTGTGGCAGGAGAGTGCTATTTTCCTTTCCAAACTGTTGCTTCCTCAGATATTTGAAAAGATGGCAATGCAAAATTTAAGAGCTCTTGTTGCAGAAAGGTCGGTAATGACTGTATGCATAAGAGGAGAAACGATAGAAATACCTCATCATTCCATTGGCCTTTTACTTGAAGGATATGTTAAAACTCAAGGTCATCAAGAACTGGTAACTTCACCAGCAGCTCTTTTGCCTTCACATGGGAGTCTAAGCTTCCTAAGTTTAGAAAGTTCCAGTATAAAGAATGCAAGTTTTGCTCATAACTCATCCTCATACATAGTTGAAACAAGGGCAAGGGTAATCATGTTTGATATTGCGGCATTTGAAACCGATGCTGCTCTTTCTAGAAGGTCAAGTTCACTGTTGCCACACGCAGTTGATCATCCACATAGGCCTCTAGGTAGAGAACATAGTGGCCTTATGAGTTGGCCTGAAAATTTCTTTAAGCCAAAGCAGCATAAGCAAAATTCTGAAGATTTTGGGCAACAAACCAATAGTTTGTCTGCAAGGGCAATGCATTTGAGCATTTATGGCAGCATGGTGGAAATCCGTTTGCCAAGAAGTTTGTCAAGCAATCTGCCCCGTGCCCCTCATAGTTTATCATATCCAACCATTCAATCAGATCAGGGTCGTCCACTTGTTTCTGTGAAGTCAGAAGGAGCTGCAACTTCTAAGAAGGACCCTGAGGTGAGAGAATTCACAGGGAATGTTAAAGATCCCCCAGCTCAAAGCACAGAACGAAGAGGAAGTTATGCGGACGATACGAGTGATGAATCTGGGGGTGAAGAAGATATTATAGTAAGGATTGATTCACCAAGCACGCTGTCTTTTCGCCAGGCATCTTGA 3393 0.4153 MAEEASTSASSSEFESNPTDAVIFVGVSLALGIASRHILRGTRVPYTVALLIIGIGLGSLEYGTHHQLGKIGNGIRIWSNIDPDLLLAVFLPALLFESSFSMEIHQIKRCIVQMILLAGPGVVISTCCLGSVLKLTFPYNWSWKISLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFFRMVLGESFNWASIMKFLAQVSLGAVGMGLAFGIASVLWLGFIFNDTVIEITLTLAVSYIAFYTAQEGSDLSGVLTVMTLGMFYSAYARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVLIAEGILNGYNVFADGKSWANLFLLYSYVQASRCIVVGILFPFLRYFGYGLDWKEAVILIWSGLRGAVALSLSLSVKRSSGRSIELNSDTGTLFLFFTGGIVFLTLIVNGSTTQFILRFLDMDRLSAAKKRILNYTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNDLEGERIHPHGAPENDSTLDPMNLKDIRIRLLNGVQAAYWEMLDEGRIAQTTANILMRSVEEAIDFAPLEPLCDWRGLKPNVHFPSYYKFLQTSIFPRKLVTYFTVERLESACCICAAFLRAHRIARRQLHDFIGDSDVSSIVINESVVEGEEARKFLEDVRVAFPQVLRVVKTRQATYLVLNHLLEYVQDLEKSGLLEEKEMLHLHDAVQTDLKKLLRNPPLVKVPKMSGVHPMLGALPSSVREPLASNSKEMMKLRGLTLYKEGSKPNGIWLVSSGVVKWESKIIRNKHSFYPTFTHGSTLGLYEVLTGRPYICDVITDSVVLCFFLEGDKILSCLKSDPSVEDFLWQESAIFLSKLLLPQIFEKMAMQNLRALVAERSVMTVCIRGETIEIPHHSIGLLLEGYVKTQGHQELVTSPAALLPSHGSLSFLSLESSSIKNASFAHNSSSYIVETRARVIMFDIAAFETDAALSRRSSSLLPHAVDHPHRPLGREHSGLMSWPENFFKPKQHKQNSEDFGQQTNSLSARAMHLSIYGSMVEIRLPRSLSSNLPRAPHSLSYPTIQSDQGRPLVSVKSEGAATSKKDPEVREFTGNVKDPPAQSTERRGSYADDTSDESGGEEDIIVRIDSPSTLSFRQAS 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1702 1130 Gene3D Jelly Rolls 722 868 IPR014710 -
Lele52g1702 1130 MobiDBLite consensus disorder prediction 1045 1062 - -
Lele52g1702 1130 FunFam Sodium/hydrogen exchanger 7 712 849 - -
Lele52g1702 1130 MobiDBLite consensus disorder prediction 1099 1114 - -
Lele52g1702 1130 PANTHER SODIUM/HYDROGEN EXCHANGER 8 789 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele52g1702 1130 SUPERFAMILY cAMP-binding domain-like 723 843 IPR018490 -
Lele52g1702 1130 ProSiteProfiles cAMP/cGMP binding motif profile. 725 820 IPR000595 -
Lele52g1702 1130 Gene3D - 144 194 - -
Lele52g1702 1130 MobiDBLite consensus disorder prediction 1045 1130 - -
Lele52g1702 1130 Pfam Sodium/hydrogen exchanger family 23 435 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1702 Lele-ChrLele52 20561582 20575579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1702 18 1128 Antiporters AT2G01980 66.341 0.0 1437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1702 52 20561582 20575579 Lele52g1702 52 20561582 20575579 ECH
Lele49g1637 49 18416711 18433932 Lele52g1702 52 20561582 20575579 hybridization
Lele50g1740 50 22136036 22149986 Lele52g1702 52 20561582 20575579 hybridization