LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g1700	ATGTACAGATACCTGAAATCAAATCAAAATAAACTCATAAACGAGAGTTCTGTTTCTGTGAAAGGAAAAGCCAATGGAGGAGAAGATGCGGATACGAAACTTGCAGTTGAAGTTGACATAATGTATGCGAGAGTTTCTAACATTAGCCTCCTTCCTCTATTGACCCTTCGGCAAACCTTCAGCCATTTCCAGCGGAGGCCACAGTGTTCTCCTTCGTGGGCTTGTCTGCGTCGTCGTCGGCACATGGATATGGATCACGAGCTCCAACTTCCTCACTCTTCACTCCCTTCGTCTGAGCAGAAAAGGGGTACATGGAAAACACTGGTACTTGCATATAGGACTTTGGGGGTTGTATTTGGCGGACTTGTGACATCGCCGCTATATGTTTACCCTTCAATGCCATTGAAGTCTCCAACAGAAGATGACTATCTGGGTATCTACAGCGTCATGTTCTGGACTCTCTCTCTAATAGGGGTTGTAAAATATGCCAGCATAGCTCTCAAAGCTGATGATCATGGGGAAGGTGGAACTTTTGCCTTGTATTCATTACTTTGCAGGCATTTGAATATAGGTATCCTGCCTTCCAAGCAATCTCATTTACTCTCAACTAAAAGTTCAAACATGCAAAGGGGCATCGAAACACAGAGTAGGCTTGGTAAATTTTTTGAAAGAAGTCTGGTTGCTCGAAGAGTATTACTTTTTGTTGCCATGTTAGGCACATGCATGCTTATAGGTGATGGCATACTTACACCTGCAATTTCAGTTTTGTCAGCAATTGATGGAATAAGGGCACCTTTTCCATCAGTCAGCAAATCACTCGTGGAAGCACTTTCTGTGGTTGCCTTGGTCTTTCTGTTCTTGCTGCAGAAATATGGTACATCGCGTGTGAGTTTCCTGTTTTCCCCCATAATGGGTGCATGGACCTTGAGTACCCCACTTGTGGGAATTTACAGCATCATACGCCACTATCCAAGTATATTCAAGGCTTTATCACCACACTACATTTTCCGTTTCTTTTTGAAAAATGGAAAAACTGGATGGCTTTTACTTGGTGGTACAGTCCTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTTAACCAGCCGTCCATTCAGATAGCATTTTTATTCACAATTTACCCATCTTTAGTTCTGACTTACGCGGGACAGACCGCTTACCTCATCAAGAATCCCAATGATCATGATGATGGATTCTACAAGTTTATACCATCTCCAATCTACTGGCCTATCTTTGTTATTGCAACATCTGCTGCAATTGTTGCCAGCCAATCATTGATATCAGCCACCTTTTCTGCAATCAAGCAATCTGTCGTGCTGGATTATTTCCCCCGTGTGAAGATTCTACACATGTCACATAGTAAGGAAGGAGAAGTTTACTCCCCTGAAGTGAACTACATCCTCATGGTCCTTTGTGTTGCTGTCATACTTATTTTCGGGGATGGAAAAGATATCGGGAATGCTTTCGGTGTTGTTGTTAGTCTAGTGATGCTCATCACCACTATATTACTTACACTAGTCATGATCATGATATGGAGGACTCGTGCTATTCTGGTTGCCCTATACTTCTGTGTGTTCTTTGTGATGGAAGGGGTTTATATCAGTGCAGTTTTCACTAAGCTCCTTGAAGGTGGATGGATTCCTTTCGCCATTTCTTTCATCCTCGCCATCATCATGTTCGGTTGGTTTTACGGTAGACAAAGGAAGATCGAGTACGAGGTAACCCACAAGATAACCTTAGACAGACTCGAAGTGCTTTTGGCGGATCGCAGTGTTCAAACAGTGCCTGGCTTATGCTTCTTCTATACTAACATTCAAGATGGTCTGACTCCTATACTAGGACACTACATTAAGAACATGAAATCCTTCCATAAGGTCACAATATTCACAACTCTTAGGTATCTGTTGGTCCCCAAGGTTGCTTCACATGATAGGATTGTCATAAACAAATTGAGCCACAAAGGGTTTTACAGTTGCGTGATTCAGTATGGTTATGCAGATTCTTTGAACCTTGACGGAGATCAATTTTTAGCTCAAGTTACCAGTAGTTTGATACAACATATAAAGAGTTGCAATGGCCATGTCCCATTTGATCCAAATGAGATAGAACAAGAGATTTCAAGGTTAGAAGAAGCACGGTCTGCCGGTGTGGTTCATGTTCGCGGGAAAACCCGGTTTCATACCGGCCCCAACTGTGGTTGGTTTGACAGAACTATGCTTGGATTTTATGAATTCTTGCATAAGAATTGCAGGTCTGGATTGCCTGCTCTAAGGGTTCCATTACAGCAAAGGATTGAAGTTGGAATGCTATATGAGGCTTGA	2352	0.4252	MYRYLKSNQNKLINESSVSVKGKANGGEDADTKLAVEVDIMYARVSNISLLPLLTLRQTFSHFQRRPQCSPSWACLRRRRHMDMDHELQLPHSSLPSSEQKRGTWKTLVLAYRTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGIYSVMFWTLSLIGVVKYASIALKADDHGEGGTFALYSLLCRHLNIGILPSKQSHLLSTKSSNMQRGIETQSRLGKFFERSLVARRVLLFVAMLGTCMLIGDGILTPAISVLSAIDGIRAPFPSVSKSLVEALSVVALVFLFLLQKYGTSRVSFLFSPIMGAWTLSTPLVGIYSIIRHYPSIFKALSPHYIFRFFLKNGKTGWLLLGGTVLCITGSEAMFADLGHFNQPSIQIAFLFTIYPSLVLTYAGQTAYLIKNPNDHDDGFYKFIPSPIYWPIFVIATSAAIVASQSLISATFSAIKQSVVLDYFPRVKILHMSHSKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTRAILVALYFCVFFVMEGVYISAVFTKLLEGGWIPFAISFILAIIMFGWFYGRQRKIEYEVTHKITLDRLEVLLADRSVQTVPGLCFFYTNIQDGLTPILGHYIKNMKSFHKVTIFTTLRYLLVPKVASHDRIVINKLSHKGFYSCVIQYGYADSLNLDGDQFLAQVTSSLIQHIKSCNGHVPFDPNEIEQEISRLEEARSAGVVHVRGKTRFHTGPNCGWFDRTMLGFYEFLHKNCRSGLPALRVPLQQRIEVGMLYEA	783

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g1700	783	Pfam	K+ potassium transporter	112	677	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele52g1700	783	TIGRFAM	kup: potassium uptake protein	110	782	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele52g1700	783	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	101	782	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g1700	Lele-ChrLele52	20548144	20553102	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g1700	61	782	Inorganic Solute Cotransporters	AT4G13420	35.924	3.39e-172	513