Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1657 ATGATTATTAGGAAAGATGGGAATCCTAATATTGGAAAACTTTTTGATGAATCATCACCTAGCTCGAATTCTGAAGGTAATGGTCATAAGAAAAAAGACCAACTTTCAATATTCATTGCAGGCATTGCGGTTGGCTTAATGATTTTACTTGCTATGCTAGTTTTATTGTCTTACATGTTTGTTAGAAAACGTAATTATTTTGGCAAGTTTAGAGGTCTAATAACAAAGTTGATACATCCTCGTGATGGTGAAATTGGAAAAGTCATGAAGATTGAGGTTGAAAGTGGTGGTGCTACTAGTAAAGGAGATGTTCAAGCTAGAGGTGTTGAGTATCTTCATGCTTTAGCTCAACATAGTTTCATTCATAGAGATCTTAAGCCATCCAACATTCTTCTTGGAGATGATATGCGAGCCAAAGTATCAGACTTTCGATTAGTCCGGCTTGCTCCCGAAGGAAGAAATTCAGTTGAAACTAGGCTTGCTGGAACTTTTGGATATCTTGCACTTGAGTATGCAGCAACTGGGCGAGTTACTACAAAGGTTGATGTGTATAGTTTTGGAGTAGTTCTGATGGAGATGATAACAGGGAGGAGAGTGCTTGACGATAGCCTACCAGAGGAAGACTTCCACCTGGTAATATGGTTCCGACGAATGATGCAGAACAACGACTCGTGTCGAAAGCTGATTGATCCAATTATTGATGCTGATGATGGAGCAACCATGTCAAGCATTAGGACTGTCTCAGAGTTGGCTGGCCATTGCTGTGCAAGTGAGCCTCACCAACGTCCTAGCATGGGCTATGTAGTGAACGTACTATCGCCTCTTGTTCATCAGGCTGCATGGAAGCCCATGGTGGAGTCAAGTTGTTCTTCTGATGATAATGATGCCAATAAGTATGGCATTGATCTTCATATGAGTTTGCCTCAAGCACTTATTAAATGGAAATCTTCTGAAGGACAAAGCACTTCATCAATGGCCATGGGATCTGCTTCTCAATCATTTATCACAAAATAA 1014 0.4043 MIIRKDGNPNIGKLFDESSPSSNSEGNGHKKKDQLSIFIAGIAVGLMILLAMLVLLSYMFVRKRNYFGKFRGLITKLIHPRDGEIGKVMKIEVESGGATSKGDVQARGVEYLHALAQHSFIHRDLKPSNILLGDDMRAKVSDFRLVRLAPEGRNSVETRLAGTFGYLALEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPEEDFHLVIWFRRMMQNNDSCRKLIDPIIDADDGATMSSIRTVSELAGHCCASEPHQRPSMGYVVNVLSPLVHQAAWKPMVESSCSSDDNDANKYGIDLHMSLPQALIKWKSSEGQSTSSMAMGSASQSFITK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1657 337 MobiDBLite consensus disorder prediction 1 30 - -
Lele52g1657 337 ProSiteProfiles Protein kinase domain profile. 1 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1657 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lele52g1657 337 PANTHER OSJNBA0070M12.3 PROTEIN 106 331 - -
Lele52g1657 337 SMART serkin_6 4 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1657 337 Pfam Protein kinase domain 106 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1657 337 SUPERFAMILY Protein kinase-like (PK-like) 106 283 IPR011009 -
Lele52g1657 337 Gene3D Transferase(Phosphotransferase) domain 1 105 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1657 Lele-ChrLele52 20249680 20251819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1657 106 272 Receptor kinase-like Gene Family AT4G02010 47.024 8.39e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele52g1657 Pkinase 1.1e-23 CL0016