Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1644 ATGGAGGGTGGTAGAATTGGGAGAGAAAAAGTGGGAGAGAAACTAACAAGGGATGATGATGACCATCATGAGGTTCTGAAAAAGATGATTTCCAGTCATCCTCTTTATGGCCTTTTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGGTTAGGAGAATTTGGAGAAGAAGAGTTTGATATAACAGATGTTGCTGCATGTAAGCACAAGGCAAATAATTCTGAGCTCAAAACTACAGCCACAACTCCAAGTTCTACAGAACTTGATCACTTCATGGAAGCATATTGCATGGCGCTTAGCAGCCTGAAAGAAGCGATTGAGGAACCAACAAAAGAAACAAGAGCGTTCATGAATTCAATGCACGTTGAGCTGAAGGAACTATGTAAGCCGAATCATAAGGCACAACAAGATTCTGCTATAGAGTGCAGCAGCAAGAAGAATCTTTAA 447 0.4094 MEGGRIGREKVGEKLTRDDDDHHEVLKKMISSHPLYGLLIESHFNCLKVGLGEFGEEEFDITDVAACKHKANNSELKTTATTPSSTELDHFMEAYCMALSSLKEAIEEPTKETRAFMNSMHVELKELCKPNHKAQQDSAIECSSKKNL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1644 148 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 13 131 - -
Lele52g1644 148 Pfam KNOX2 domain 86 128 IPR005541 GO:0003677|GO:0005634
Lele52g1644 148 Pfam KNOX1 domain 26 50 IPR005540 GO:0003677|GO:0005634
Lele52g1644 148 SMART KNOX1_2 24 67 IPR005540 GO:0003677|GO:0005634
Lele52g1644 148 SMART KNOX2_2 78 129 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1644 Lele-ChrLele52 20187429 20188580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1644 24 129 Homeobox Transcription Factor Family AT4G08150 29.091 1.22e-11 59.3