Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1641 ATGCAGCAATCTGCAGATTATCAACGTCGACATCATCTTCCTCCCCCTCCTCCAGATTTCTTCTCTCAGTATTTCCCTCTGGGCTTGAAGGTCCTCTTAGTTGGCATCGATAATGCCACCCAAAATAGTATTCAGAAACAGCTTCGACCACCTCATTACTACATCACTCATTGTCACACTGGTTCTTCTGCCTTACAACACTTACCTGCCAAAGATTCTTCCTTTGACTTGATTCTCAGTGATGTCTTCTTGCAAGACATGGATGGTTACCAATTCGTCAGACGCCAACGCTCCAACACAAATATTCCTCACATTTTGATAAGTGGGCTTGAAAGATCAAGTAGCAGCATAAAGACAGCATACAAAAGTGGTGTGTGTTACGTTTTGTGGAAGCCAGTGAGTGATAGTGAGCTGAAAAATTTATGGCAACATGTTTGTAGGAGGAGGGAACAAGGTGATGCCTTCTTCAATGGTGACGTGGACGACAATCATAATCATCAGCAGCAGCAGAATCAATTATTAGTACGACAGCATAATCCTCATCATCATCAGGATGAGGGTTGTTCTTCTTCTCTTGTCGTTTCCAGAGACATAAGTCCCAAGGTAGAGGACGAAAGGGAGTTTTTGAATAATCATCATGGCGATCAACAACGTCCTTACAAAAAACGACGGGTCGTCTGGTCCGGTGAGCTCCATCAGAGATTTCTTGATGCCGTGAATTGTCTTGGCGGCGTAGAAAGTCGTCAGGTGGTTCCACTGGCAATGGTACCTCCATCAGCTTTTGCAGGAAATGGAAGCAATATGCAGCAGCAACAGATAGCTCAAAACCTGATCACTTCTGGTGTGCAGCAGCAGCAACTAGATCAAAACCTAGCTTTAGCTTCTTGCCATGAAAACAAGATGAAGCAGTTTGATCAAAACCTAGCTTCTGCTTCTTGCCATGCAGGCAATATGAAGCATCATCAAGATCAAAACCTAGCTTCAGGTACTTCCTATGGAAGTAATATGCAAATAACTCAAAACCTTACTTCTGGTATCCATCATCTAGAGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAGGCAATATGCAGCATGTTGATCAAAACCTTGCTTCAGATTCTTGCCGTGGAAACAATATGCAGAATGTTGACCAAAACCTAGCTTCAGGTTCTTATGTTACTACTACTAGAGGCGGTAATAATAATGATGGAATCATCAAGTCAGAATCAGCACCTATACCTGATGATGATGATGATGATGATGATTTTTTTTATAATTTTGATGATAACTTGGACGAGGCAATTCCTAACTTACTTATGGCTGATCCACATCATACCCAATACCAGTTGCATGATTAA 1365 0.4212 MQQSADYQRRHHLPPPPPDFFSQYFPLGLKVLLVGIDNATQNSIQKQLRPPHYYITHCHTGSSALQHLPAKDSSFDLILSDVFLQDMDGYQFVRRQRSNTNIPHILISGLERSSSSIKTAYKSGVCYVLWKPVSDSELKNLWQHVCRRREQGDAFFNGDVDDNHNHQQQQNQLLVRQHNPHHHQDEGCSSSLVVSRDISPKVEDEREFLNNHHGDQQRPYKKRRVVWSGELHQRFLDAVNCLGGVESRQVVPLAMVPPSAFAGNGSNMQQQQIAQNLITSGVQQQQLDQNLALASCHENKMKQFDQNLASASCHAGNMKHHQDQNLASGTSYGSNMQITQNLTSGIHHLESSQNLASSSCHGGNMQHVDQNLASDSCRGNNMQNVDQNLASGSYVTTTRGGNNNDGIIKSESAPIPDDDDDDDDFFYNFDDNLDEAIPNLLMADPHHTQYQLHD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1641 454 Gene3D - 26 155 - -
Lele52g1641 454 MobiDBLite consensus disorder prediction 398 419 - -
Lele52g1641 454 SUPERFAMILY CheY-like 29 154 IPR011006 -
Lele52g1641 454 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 307 IPR045279 GO:0009736
Lele52g1641 454 Pfam Response regulator receiver domain 32 140 IPR001789 GO:0000160
Lele52g1641 454 Gene3D - 220 291 - -
Lele52g1641 454 ProSiteProfiles Response regulatory domain profile. 30 146 IPR001789 GO:0000160
Lele52g1641 454 SMART REC_2 29 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1641 Lele-ChrLele52 20164879 20168517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1641 25 243 Response Regulator Gene Family AT4G16110 32.000 2.99e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele52g1641 Response_reg 1.4e-11 CL0304