Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1621 ATGGGAAGGGGAAGTATCCTGTATGGTCGGGTGTTAACGACGATGGTGGACAACAAAATCAAGTTCACCTTTTCTCTTTTGTGGTCTGTGTTCATCATCATCATCACCTTCTTGGGAGTGAAGGACGATGATGATTGTTCTGAACTTTCCAAGAAAAACTTTTGTGCCTTTTTGGTGGGGAGCGACACAAACATCAACAACTGGTCCTCTGTTTCTGCCTCATGGGCTAGTGTTCTCAGGCGTCGTGCAAGAAAAACTATGATCAAATCCAAAAGCTTTCTTCAAAGTATTATGAAACATCTCAAATTCGGGTCAAGCAGAGAGAGGCAGAACGAAGAGGACGTTCAGCGGATTGCCGCCAGGGAGCAGAAGGTCTTTTCCTACGAAACCTTAGTGTCGGCGACGAAGAATTTCAATCCTCATCACAAGCTGGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTAGAAGATGGAAGAGAGATAGCAGTGAAGAAGCTATCGGTGAGATCAAACCAAGGGAAGAAGGAGTTCGTAAATGAGGCAAAATTGTTGGCGCGTGTGCAACACCGCAATGTTGTGAATCTGTGGGGCTATTGTGTGTATGGTTCTGAGAAGCTTCTTGTTTACGAGTATGTTCCTCATGAGAGCCTTGACAAAATTCTCTTCAAATCAGATAGGAGAAAAGTGCTCGACTGGGAAAAGAGGTTTGGAATAATAATGGGAATAGCTAGAGGATTGCTTTATCTTCATGAAGATTCTCATGACTGCATAATTCACAGAGACATAAAAGCTAGCAATGTTCTTCTTGACGATAAATGGAATCCTAAGATCGCAGATTTCGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCATGTCAAAACTCGTGTCGCTGGAACCAATGGATACATGGCTCCAGAATATATAATGTATGGCCGTTTATCGACAAAAGCAGACGTATTTAGTTTTGGAGTTCTGATGTTGGAGATCATCAGTGGTCAACGAAACTTATCATTCAACTTGGATGTAGATGCACAGAACCTTATTGATTGGGCGTACAAGCTTTACAAAAAAGGGCGAAGCTTAGAAATCATGGACACTGCAATAGCAGCTTCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAACTTGGCCTGCTATGCATTCAAGGTGACCCCAACCAACGCCCCACCATGCACCGGGTGGTGGTGGTGTTGTCAAAAAAGCCGGGCCACTTGGAAGAACCGACAAGACCTGGCGTGCCGGGTAGCTCGAGATACCGAAAGCATCACAATCGTAATCCTTATGCATTGTCTTCCACAGTTGGTAGTGGTTCTAGTGAATCTAGTACACATACAGGTGTTTCAAGCAATATCTACGACACTAGGTCAACCGCAACGGCGGTCACAGCCGCCACAACCATGACCGCAACCACCTCAGCTTCCAGAGAATTAGACTCACGTGGAAAACATGAGTTAGATATGGTGATCTTCAAGGTTTCCCGAGTACAAACCACGCCTTTTGACGGCCAGAAGCCTGCAACTTCTGGTCTCCAGTTAAATAGAGCAATGAAAGGGAGTAATGAATTTCAGTGCTTGCAAGGAATCAGTCCAACTTATATTGAAGATTTGGATGATGATTCCTTTTCCCGAAGTTACAAGTTCCATGTGAAAGTATTCATTCAGCCAAATTACCTGCACAATTTTGTTCAGTCAACTTTCAATGCCCTGACCTCAGAAAAAGTTAGAGGTGCTACACTAGTTGTATCAGGGGATGGTCGCTATTTTTCAAAGGAAGCAATTCAGGATTGGATAGCATTGTATAGTACTGTGCAGCCTAAGCTGTCAATTACACCATTGTATTCACTTATCATGGTTTGCACAGAGTTTAAATTCTTGGGATCCAGAGCAACAGGGGCATTTATTCTCACTGCAAGTCATAATCCTGGTGGACCTCATGAGGATTTTGGGATTAAATATAACATGGAAAATGGTGGGCCAGCTCCAGAGGGAATTACTAACAAGATCTATGAGAACACAACAACGATTAAGGAGTACTTCATTGCTGAAGATCTTCCTGATGTGGATATAACCACAACAGGTGTTACAAACTTTACAGGTCCCGAAGGACCATTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTATGTAAAGTTGATGAAGTCAATCTTTGATTTTGAGTCTATCAGGAAACTGTTATCATCTCCGAAATTCACATTCTGTTATGATGCACTGCATGGTGTTGCGGGAGCTTATGCAAAGCGCATATTTGTGGAAGAGCTTGGGGCACAAGAAAGCTCTTTACTCAACTGTACACCAAAGGAAGACTTTGGTGGAGGGCACCCAGATCCCAATTTGACCTATGCGAAGGAGTTGCTCGCTCGCATGGGATTGAGCAAAGCAGAACCTCATGATGAGCCACCAGAATTTGGTGCGGCTGCTGATGCCATAATTGCTGCAAATTCTGTTGAAGCTATACCCTATTTTTCCAGTGGCTTGAAGGGAGTTGCCAGGAGTATGCCAACATCTGCTGCCCTGGATGTTGTAGCCAAACATTTGAACCTGAAATTTTTTGAGGTCCCCGCTGGTTGGAAGTTTTTTGGTAACTTAATGGATGCTGGATTATGTTCAGTATGTGGTGAAGAAAGCTTCGGAACTGGTTCCGACCATATTCGTGAGAAAGATGGAATCTGGGCAGTTCTGGCCTGGTTATCTATTCTTGCATATAAAAATAAAGATAAGCTTGGTGGAGACAAACTCGTGACAGTTGAAGATATAGTTGTTCAGCATTGGGCTACTTATGGGCGCCATTTCTATACTCGATATGACTATGAATCCTCGCTTTCTGAAGTCAATCAGATTATCAAGGGAGTAAGGTCAGTTGTGTCAAATGTTGTCCATGCTGATGAATTTGAATACAAAGATCCTGTGGATGGTTCCATTTCATCACACCAGGGCATCCGTTATTTGTTTGAGGATGGATCACGATTGGTGGAGGTTGCACTGAAACTTTCTAAGATGCAAGAACTCACCGGTCGATCTGCTCCAACAGTCATCACATAA 3090 0.4366 MGRGSILYGRVLTTMVDNKIKFTFSLLWSVFIIIITFLGVKDDDDCSELSKKNFCAFLVGSDTNINNWSSVSASWASVLRRRARKTMIKSKSFLQSIMKHLKFGSSRERQNEEDVQRIAAREQKVFSYETLVSATKNFNPHHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGKKEFVNEAKLLARVQHRNVVNLWGYCVYGSEKLLVYEYVPHESLDKILFKSDRRKVLDWEKRFGIIMGIARGLLYLHEDSHDCIIHRDIKASNVLLDDKWNPKIADFGMARLFPEDETHVKTRVAGTNGYMAPEYIMYGRLSTKADVFSFGVLMLEIISGQRNLSFNLDVDAQNLIDWAYKLYKKGRSLEIMDTAIAASAVPEQVAMCIQLGLLCIQGDPNQRPTMHRVVVVLSKKPGHLEEPTRPGVPGSSRYRKHHNRNPYALSSTVGSGSSESSTHTGVSSNIYDTRSTATAVTAATTMTATTSASRELDSRGKHELDMVIFKVSRVQTTPFDGQKPATSGLQLNRAMKGSNEFQCLQGISPTYIEDLDDDSFSRSYKFHVKVFIQPNYLHNFVQSTFNALTSEKVRGATLVVSGDGRYFSKEAIQDWIALYSTVQPKLSITPLYSLIMVCTEFKFLGSRATGAFILTASHNPGGPHEDFGIKYNMENGGPAPEGITNKIYENTTTIKEYFIAEDLPDVDITTTGVTNFTGPEGPFDVEVFDSASDYVKLMKSIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELLARMGLSKAEPHDEPPEFGAAADAIIAANSVEAIPYFSSGLKGVARSMPTSAALDVVAKHLNLKFFEVPAGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDKLGGDKLVTVEDIVVQHWATYGRHFYTRYDYESSLSEVNQIIKGVRSVVSNVVHADEFEYKDPVDGSISSHQGIRYLFEDGSRLVEVALKLSKMQELTGRSAPTVIT 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1621 1029 CDD STKc_IRAK 144 410 - -
Lele52g1621 1029 ProSiteProfiles Protein kinase domain profile. 138 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1621 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lele52g1621 1029 SUPERFAMILY Phosphoglucomutase, first 3 domains 723 824 IPR016055 GO:0005975|GO:0016868
Lele52g1621 1029 FunFam Cysteine-rich receptor-like protein kinase 10 215 420 - -
Lele52g1621 1029 Gene3D - 568 731 - -
Lele52g1621 1029 SMART serkin_6 138 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1621 1029 Gene3D Transferase(Phosphotransferase) domain 1 214 417 - -
Lele52g1621 1029 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 560 688 IPR005844 GO:0005975|GO:0016868
Lele52g1621 1029 MobiDBLite consensus disorder prediction 436 460 - -
Lele52g1621 1029 SUPERFAMILY Phosphoglucomutase, first 3 domains 845 950 IPR016055 GO:0005975|GO:0016868
Lele52g1621 1029 FunFam Phosphoglucomutase 5 729 831 - -
Lele52g1621 1029 MobiDBLite consensus disorder prediction 412 460 - -
Lele52g1621 1029 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 826 943 IPR005846 GO:0005975|GO:0016868
Lele52g1621 1029 Pfam Protein kinase domain 140 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1621 1029 SUPERFAMILY Protein kinase-like (PK-like) 123 416 IPR011009 -
Lele52g1621 1029 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 724 803 IPR005845 GO:0005975
Lele52g1621 1029 Gene3D - 826 945 - -
Lele52g1621 1029 Gene3D - 732 825 - -
Lele52g1621 1029 FunFam Cysteine-rich receptor-like protein kinase 10 102 213 - -
Lele52g1621 1029 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 642 651 IPR016066 GO:0000287
Lele52g1621 1029 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 500 1007 IPR045244 GO:0004614|GO:0005975
Lele52g1621 1029 Gene3D - 946 1008 - -
Lele52g1621 1029 PRINTS Phosphoglucomutase/phosphomannomutase family signature 782 795 IPR005841 GO:0005975|GO:0016868
Lele52g1621 1029 PRINTS Phosphoglucomutase/phosphomannomutase family signature 641 655 IPR005841 GO:0005975|GO:0016868
Lele52g1621 1029 PRINTS Phosphoglucomutase/phosphomannomutase family signature 746 765 IPR005841 GO:0005975|GO:0016868
Lele52g1621 1029 SUPERFAMILY Phosphoglucomutase, C-terminal domain 945 1029 IPR036900 GO:0016868|GO:0071704
Lele52g1621 1029 Gene3D Phosphorylase Kinase; domain 1 100 213 - -
Lele52g1621 1029 SUPERFAMILY Phosphoglucomutase, first 3 domains 559 753 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1621 Lele-ChrLele52 20029909 20046517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1621 126 428 Receptor kinase-like Gene Family AT4G11530 50.820 3.08e-98 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele52g1621 Pkinase 2.5e-50 CL0016