Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1603 ATGTGTGATGATTCATTCAGTGCCTTCAAGCTTCACTCTAATTACACCCCAAATCCTTATTGTATTTGTGCCCACTGCAATCTTCGCCATCTGGGAGAGGAAGAAGGAGGCATTACTATTACGAGCAGCTCAAGGTGGAGCCCAACACCTGCACAACTGCTTTACCTCGAGCAACTCTACACACAGGGAACCAAGACTCCAACGGCTCAGCAAATACAGTTAATAGCTTCCCAGCTACGTCGTTTTGGCAATATACAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGACCGCCACAAACGTTGTAGTTCCCACACGCAAATCTCTCCTCCTCCTCCTCCTCCTGCTGCTCTGCAACACGCTCCTCGTCAAGGGACACGTTATGAAGTTAAAGAGACAAACAAGTGGGCATCATCTTCAAACTGCAGTGCACTTGCAGAGGTTTCTGATTCACTGAATAGAGCAGAAAGAGGATCTTATAGGAGGACTCAAAGGGAAGAGGAGAGAGAAATACAAATTTTGAGAATCAAGAGAGAGAAAAGCCAAGAAGCTAAGTGCCAAATTAGAGATCATATGTCTTCTTTCTTCCTTTCAAATTCCAAGCATCTCGTCATCAAAAGCATTATCACTAATACACAAACTTCGAACCCTACAAATTATTATCGTCATGATGATGAAGAAGAAGTTGCAGATGACAGAACCCTTAAGCTGTTTCCTCTTAAGAGATCAGATGGAGATGATGAAAGTAGCAAAGATAAAGATAAATTCTGTTCCTTCAATGCTTCCATGGACTCTGATGAAATCACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAGTGATATAATATAG 867 0.421 MCDDSFSAFKLHSNYTPNPYCICAHCNLRHLGEEEGGITITSSSRWSPTPAQLLYLEQLYTQGTKTPTAQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRHKRCSSHTQISPPPPPPAALQHAPRQGTRYEVKETNKWASSSNCSALAEVSDSLNRAERGSYRRTQREEEREIQILRIKREKSQEAKCQIRDHMSSFFLSNSKHLVIKSIITNTQTSNPTNYYRHDDEEEVADDRTLKLFPLKRSDGDDESSKDKDKFCSFNASMDSDEITSNQFFEFLPLRSDII 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1603 288 ProSiteProfiles 'Homeobox' domain profile. 39 104 IPR001356 GO:0003677
Lele52g1603 288 SMART HOX_1 41 108 IPR001356 GO:0003677
Lele52g1603 288 CDD homeodomain 45 105 IPR001356 GO:0003677
Lele52g1603 288 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 36 280 IPR044555 GO:0003700|GO:0099402
Lele52g1603 288 Coils Coil 168 188 - -
Lele52g1603 288 MobiDBLite consensus disorder prediction 103 130 - -
Lele52g1603 288 Gene3D - 41 103 - -
Lele52g1603 288 SUPERFAMILY Homeodomain-like 43 104 IPR009057 -
Lele52g1603 288 Pfam Homeodomain 43 103 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1603 Lele-ChrLele52 19913128 19915272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1603 40 105 Wox Gene Family AT3G18010 66.667 2.06e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele52g1603 Homeodomain 6.9e-17 CL0123