Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1598 ATGCAATTAACCTTAATAAGATACCCAAAAATGGAGGAGTTTCAAGGGGGAAACGAAACTGCAATGAGCAAAGAAGATAGCAAAAGAAAAGGCAACAAAAGAGAAGAACTTCGCTGTATAACTTTTGCTTCAACGACGCGAATTTTGCCCCCTCTCTGCGAAATGGACAACCAAGTTGTTCAGCGCGTCTTCCATGAAGGAGGCCGCGACTACTATCAACAACAGCCTTCTACATCTTCATCTTCCTCCTCCATCCTTCAATCTCTCCCTCTCCATTCTTTTGATCATGGCTATTATTTATTAGTAAAATCTATCCAAGAACTTCGAGAGAAAAAGTACGGTCTTGTTACAATTGGCATTGGTGGTCCTAGTGGTTCTGGTAAATCAAGCTTGGCAGAGAAGGTGGCATCTGTTATTGTTTGCACTGTTATATCAATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAGGAATCTTGAGGATTTGACCAAAGGCAATGATACACTGATTCCTGTGTTTGACTATCAACAAAAGAGACGTGTTGGATATAAAGCAATAAAGAGTGCTTCGTCAGGGGTGGTAGTAGTTGATGGTACATATGCTCTACACGCGAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAACCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGTCATCTACAAGGTGAAATGCAGAAGTGAGTCTCCTGATCGACATTTGGGTTCTGCCTTTCAAGAAGATGAGGCCCAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACGATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGCGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGATTGCTTGCTCTGGGTTACTCAGTTGTTGTTAGCTATAAACGTGCATCTACAACTGTCAGTAATGGCAATGTTTCTGTGTCTTTCGAAACCATTGATGCTCTGGGTGAGACATACATGGTGCTGAGGGGAACAAATAGGAAAACTGTTGGAACAGAAGCATTAAAGCTGGGGGGTGAGATTGGTCAGTTATCTGCTGTTCTTATATTGTCTATCATCAGTGTACCTCGTCTCAGTACACCACCACTCGTGTCTAATACACCTATGTCTGGTAATCCAGAAAGAGAAATTGTTGCACCAAAGCCAATCCGGGTTACCCCTGACCTTGTAACTGGAGTTGAGGATATATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCATATTCATCTCAGACGGGCAACACAGTACTAGACCTTTTATACTTAGACTTCTCTCATGAAGCAACCACAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGACTTCCAGTCATAGTTGGAATTGGTAATGCAAGATATTTTCTGATACCTATCTCTGCATGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAATCGAGTAAAGGATTTTAAATATGATAACTTCAGCTCGCTTGATCTGGCTTTGCTATCAAAGAATATTGATGACATACGAAATGTTCGGAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTGGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGCTGCACATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAGGTAGCTTATCAAGATATTCTTACGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAATTCATTGATATATATTTAAAGCTTCCTGGGATCCCCTCTAACGGACAGTTGACAGAGGGTGATTGTATAAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCGAAAGTGGATTTTGATATTGGCATTAGTACAGTTGCAGGTCTTCTCAATCTTGGGTATCTAGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAGGATGGCAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGCGTTGATAAGGATGCTGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGTGGCATCCACTCTCAACAGTCTGCGAGGATGCAAGAAATCGTTGAGTTTATTCAATCTCAGGTATCTCTTACTCTTTGGATGGATATTTTATCTAGCTTTCAGGACTAAGGTTTTATGGACATTTCTGATGTCTGCTCTGGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGATACTCATGAAATACAATACAGGGCTTGAAAGTTTTAGGAGTGGCAAGTTCATTTTTTTTCCTTGTCGGCTTAATGGAAGTGGCAAGTTCGTAGAAGCTAACAAAAGTGACTAA 3129 0.4036 MQLTLIRYPKMEEFQGGNETAMSKEDSKRKGNKREELRCITFASTTRILPPLCEMDNQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHSFDHGYYLLVKSIQELREKKYGLVTIGIGGPSGSGKSSLAEKVASVIVCTVISMENYRNGVDEGNDLDSIDFDALVRNLEDLTKGNDTLIPVFDYQQKRRVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREVIYKVKCRSESPDRHLGSAFQEDEAQTDNCIEMYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNGNVSVSFETIDALGETYMVLRGTNRKTVGTEALKLGGEIGQLSAVLILSIISVPRLSTPPLVSNTPMSGNPEREIVAPKPIRVTPDLVTGVEDISQPWTRSPRKSKMEPVIATWRFISSYSSQTGNTVLDLLYLDFSHEATTDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGLPVIVGIGNARYFLIPISAXGPSGSGKTSLAHKMANIIGCEVVSLESYYNRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYLAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQVSLTLWMDILSSFQDXGFMDISDVCSGGLFTISKEASMILMKYNTGLESFRSGKFIFFPCRLNGSGKFVEANKSD 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1598 1042 SMART AAA_5 591 735 IPR003593 -
Lele52g1598 1042 SMART AAA_5 114 264 IPR003593 -
Lele52g1598 1042 Pfam Phosphoribulokinase / Uridine kinase family 595 759 IPR006083 GO:0005524|GO:0016301
Lele52g1598 1042 Pfam Phosphoribulokinase / Uridine kinase family 118 276 IPR006083 GO:0005524|GO:0016301
Lele52g1598 1042 CDD UMPK_like 131 279 - -
Lele52g1598 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 229 IPR027417 -
Lele52g1598 1042 CDD UMPK_like 582 762 - -
Lele52g1598 1042 PANTHER URIDINE KINASE 559 757 - -
Lele52g1598 1042 SUPERFAMILY CYTH-like phosphatases 800 934 IPR033469 -
Lele52g1598 1042 Gene3D - 594 768 IPR027417 -
Lele52g1598 1042 Gene3D - 116 295 IPR027417 -
Lele52g1598 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 762 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1598 Lele-ChrLele52 19873155 19884982 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1598 52 19873155 19884982 Lele52g1598 52 19873155 19884982 ECH
Lele49g1197 49 7949558 7966112 Lele52g1598 52 19873155 19884982 hybridization
Lele50g1643 50 21480178 21490555 Lele52g1598 52 19873155 19884982 hybridization