Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1594 ATGATCGGCAACTTCTACGAACTTGGTCCATGGCGCGTCACAAAATCCCTCAATCTCGCCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCCTCGTTTTCCTCGATAGCCCAATCGGAACAGGATTCAGTATCGCCTCAAACCCTGACGAAATCCCCAGAGACCAGAAATCTGTCGCCAAACACCTCTTCGATGCTATAACCAAGTTCATCCAACTTGATCCTGCTTTCAAGTATCGCCCAATCTATATAACCGGCGAAAGCTACGCCGGGAAGTATGTTCCTGCAATTGGGTATTACATATTACAAAGGAATTCACGTTTGAATGCTTCCCAGAGGGTGAATTTGGCAGGTGTGGCTATTGGGGATGGATTAACACACCCTATAGTACAAGTTTCAACTCATGCTTTGAATGCTTACTACATCGGTTTGATCAATGAGAGGCAGAAGAATGAATTGGAGAAGGCTCAATTGGAAGCAATCAGATTGACCAAATTGGGGAATTGGAGCGCAGCAACAGATGCTAGAAGTGATGCTTTGCGTCTGTTGCAGAACATGACTGGTTTAGCTACTTTGTATGACTACAGAAGAAAAGCTCCATATGAAGATTATTTGGTGGATGAGTTCTTGAAATCCAGCGATGTGAAGAAGTCACTAGGGGTGAATGAATCTGTTGTGTTTGAAGAATGTAGTGATGCTGTAGGAATCGCAATGAAAGAAGATATTATGAAGAGTGTGAAGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTTATGTACCAAGGGCAGTATGATCTGAAAGATGGTGTGGTTCAAGTAGAAGCGTGGGTGAAGAGAATGAAATGGGAAGGGATTGACAAGTATTTGAATGCAGATAGGAAGATATGGAAAGTGAATGGCGAGATTGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTTGTTTTAAGATCTGGCCATCTTTTGCCTGCTGATCAATCTGTGATTTCTCAAGCCATGATTGAGAACTGGGTTTTGCAGAAAGATTTGTTTGTGAACGATGATTAA 1059 0.4287 MIGNFYELGPWRVTKSLNLAPNPGSWNRIFGLVFLDSPIGTGFSIASNPDEIPRDQKSVAKHLFDAITKFIQLDPAFKYRPIYITGESYAGKYVPAIGYYILQRNSRLNASQRVNLAGVAIGDGLTHPIVQVSTHALNAYYIGLINERQKNELEKAQLEAIRLTKLGNWSAATDARSDALRLLQNMTGLATLYDYRRKAPYEDYLVDEFLKSSDVKKSLGVNESVVFEECSDAVGIAMKEDIMKSVKYMVEYLVTKTRVLMYQGQYDLKDGVVQVEAWVKRMKWEGIDKYLNADRKIWKVNGEIAGYVQKWQSLTNVVVLRSGHLLPADQSVISQAMIENWVLQKDLFVNDD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1594 352 PRINTS Carboxypeptidase C serine protease (S10) family signature 70 95 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 PRINTS Carboxypeptidase C serine protease (S10) family signature 22 34 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 PRINTS Carboxypeptidase C serine protease (S10) family signature 314 327 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 PRINTS Carboxypeptidase C serine protease (S10) family signature 35 45 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 Pfam Serine carboxypeptidase 1 343 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 330 IPR001563 GO:0004185|GO:0006508
Lele52g1594 352 Gene3D alpha/beta hydrolase 1 351 IPR029058 -
Lele52g1594 352 Coils Coil 146 166 - -
Lele52g1594 352 ProSitePatterns Serine carboxypeptidases, serine active site. 84 91 IPR018202 GO:0004185
Lele52g1594 352 SUPERFAMILY alpha/beta-Hydrolases 1 345 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1594 Lele-ChrLele52 19854096 19855154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1594 215 347 Calmodulin-binding Proteins AT2G22960 21.805 1.51e-08 52.4