Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1593 ATGGATTCAACAGCGAGATTCCACTCTCTCACACTCCTCATCATCTTCATCTTCTTCTTCATCTTCAATGATTCTGCTTCTTCTTCAAATCCAACCCCTTACTTCCCAAAACAAGCCTTACCCACAAAATCTGGCTACCTCCCTGTTAACCCCAACTCCAAATCCGCCATTTTCTACGCTTTCTATGAAGCCCAGAACCTCACTTCACATCTCTCCCAAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGCAACTTTTTCGAGCTTGGACCATGGCGCGTCACCAAGTCCTTGAATCTAATCCCCAATCCTGGTTCTTGGAACAGAATTTTTGGCCTTCTTTTCCTTGATAACCCAATCGGAACTGGATTCAGTATCGCTTCAAACCCTGACGAAATCCCCAGAGATCAAAATTCAGTGGCCGAACACCTCTTCACAGCTATAACCAAGTTCATTCAACTGAACCCAGCTTTCAAGGATCGCCAAATCTATATAACCGGCGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTATTACATATTACAAAGGAATTCACGTTTGAATGCTTCCCAGAGGGTGAATTTAGCAGGTGTGGCGATTGGAGACGGGTTAACTCACCCAGAAGTGCAAGTTATTGCTCATGCTGTGAATGCTTACTTCTTAGGGTTGATCAACGAGAGGCAGAAGAATGAGTTGAAGAAGGTTCAATTCGAAGCCGTCAGATTGATCAAACAGGGGAATTGGAGTGCTGCAACAGATGCAAGAATCACCGTTTTCAGATTGTTGCATGACATGACAGGGTTGGCAACTTCGTTCGACTTCACCAAAAAAGCTCCTTATCAGAGTCATTTGGTCACTGATTTCTTGAAATCCAGCGAGGCGAAGAGGGCACTCGGGGTGAATGAATCTCTTGTTTTTGAAGGATGTAGTGATACTGTAAAAGCTGCATTGCATGAGGATGAGATGAAGAGTGTGAAGCACATGGTGGAATACTTGGTGACGAAAACCAGAGTTCTTCTATACCAAGGCCAGCATGATCTGAGAGATGGTCCAGTTCAAGTAGAAGCATGGGTGAAGACGATGAAATGGGAAGGAATTGAGAATTATTTGAATGCAGAGAGGAAGATCTGGAATGTGAATGGGAAGCTAGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTGATTTTGGGAGCTGGCCATTATTTGCCAGCTGATCAAGCCGTGAACTCTCAAGCCATGATTGAAAACTGGGTTTTGCAGAAGGATTTGTATGAGAATGATAATGTTTAG 1326 0.4465 MDSTARFHSLTLLIIFIFFFIFNDSASSSNPTPYFPKQALPTKSGYLPVNPNSKSAIFYAFYEAQNLTSHLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLIPNPGSWNRIFGLLFLDNPIGTGFSIASNPDEIPRDQNSVAEHLFTAITKFIQLNPAFKDRQIYITGESYAGKYVPAIGYYILQRNSRLNASQRVNLAGVAIGDGLTHPEVQVIAHAVNAYFLGLINERQKNELKKVQFEAVRLIKQGNWSAATDARITVFRLLHDMTGLATSFDFTKKAPYQSHLVTDFLKSSEAKRALGVNESLVFEGCSDTVKAALHEDEMKSVKHMVEYLVTKTRVLLYQGQHDLRDGPVQVEAWVKTMKWEGIENYLNAERKIWNVNGKLAGYVQKWQSLTNVVILGAGHYLPADQAVNSQAMIENWVLQKDLYENDNV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1593 441 Gene3D alpha/beta hydrolase 24 441 IPR029058 -
Lele52g1593 441 FunFam Carboxypeptidase 26 437 - -
Lele52g1593 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 418 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Lele52g1593 441 Pfam Serine carboxypeptidase 40 431 IPR001563 GO:0004185|GO:0006508
Lele52g1593 441 Coils Coil 234 254 - -
Lele52g1593 441 SUPERFAMILY alpha/beta-Hydrolases 40 434 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1593 Lele-ChrLele52 19851609 19852934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1593 328 435 Calmodulin-binding Proteins AT2G22960 25.000 6.05e-07 47.8