Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1585 ATGCCCTATCAAATCTACTGGACAAAGAAAAGATCAAAACTTCAAGTTGATCGTATCAATATGTTGTGTGATGGCTTTTCTTCTTCTGGCATCTATTGTTGCTATTTACCATGGGAGGAAACGAAGCAAGAAAACTTCTTCAGCACAATTGGAGTAAAGGGTACTATCGGCTATGTTCCTCCAGAATACGGAATGGGTTCTGAGGTGTCAACACAAGGAGACATGTATAGTTTTGGTATTCTTATTTTAGAGATGTTAACGAAGAGAAGACCTACTGACGATATGTTTATGGAAGGTCATGATCTTCATAAATACGTGGAAATTGCTTTTCCAAACAATCTTATGCATGTTGTGAGCCCAACTATTCTACCTACTGGATCAGAAGTACATGTGGGAGCATCATGTGACATACAGGAGAACATGGTAAGGATGCATCCTAACGTGGAGAAATGCACATGTCGTTTGTTTAGGATTGGACTGGCTTGCTCTATGGAATCACCACATGAAAGAATGAGTGCAGCAGATGTTATCAAGGAGCTTATCTCTATCAAAAGGTAA 558 0.3943 MPYQIYWTKKRSKLQVDRINMLCDGFSSSGIYCCYLPWEETKQENFFSTIGVKGTIGYVPPEYGMGSEVSTQGDMYSFGILILEMLTKRRPTDDMFMEGHDLHKYVEIAFPNNLMHVVSPTILPTGSEVHVGASCDIQENMVRMHPNVEKCTCRLFRIGLACSMESPHERMSAADVIKELISIKR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1585 185 Pfam Protein tyrosine and serine/threonine kinase 46 108 IPR001245 GO:0004672|GO:0006468
Lele52g1585 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1585 185 Gene3D Transferase(Phosphotransferase) domain 1 28 185 - -
Lele52g1585 185 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 184 - -
Lele52g1585 185 SUPERFAMILY Protein kinase-like (PK-like) 47 180 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1585 Lele-ChrLele52 19756136 19757501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1585 43 184 Receptor kinase-like Gene Family AT3G47570 41.379 5.08e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele52g1585 PK_Tyr_Ser-Thr 2.7e-05 CL0016