Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1554 ATGGTGGCTTTTGGCGGGAAAAAGTTGCGCCAAATGGTTTCAGGCTTCGGTGGTAACGGTCTTGGCCAGGTCCTCGCCGCTGTGGCTGTGACCGTCCTTGTCCGCCTCTTCTCTGGTCCCGGTCCCGTACTCCCACCAGAAACCGAGAATGAGGACTACGACGATGGCGGGGAGAAGGATGATGTTGAAGAAGGTGAGAGTGAAGGTCCGGTTTCTGGTAACGTTTTCGCGGTTACAATCCGGTGGAGCAACATCACCTTGTCTCTTTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTCAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTAGCTATAATGGGCCCGTCAGGTTCTGGAAAAACTACATTGCTCAATGTTCTTGCGGGTCAACTAGCAGCATCTCCCCGGCTGCATCTGTCAGGCCTTTTGGAGTTCAATGGCGAGCCTAGTTCAAAGAGAAGTTATAAGTTTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCACAGCTCACAGTGCGAGAGACATTGTCCATTGCTGCAGAACTCCAGCTTCCTGGCATATCTTCCGTGGAAGAGAGAGATGAATACGTGAAAAATCTCTTGTTCAAACTAGGATTGGTCAGCTGTGCTGATACCATTGTCGGTGATGCAAAAGTTCGGGGAATTAGTGGTGGTGAAAAGAAACGTCTATCTCTGGCATGTGAGCTTCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCAACTACTGGACTTGATGCCTTTCAGGCTGAGAAAGTGGTCGAAACTCTCCAACAACTTGCACAAGATGGTCATACAGTAATTTGCTCTATTCATCAGCCAAGAGGTTCAGTGTATAACAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGCACCATTGCCCTGAGCATGTGAATCCTGCTGAATTTTTGGCCGATCTTATATCCATTGACTACAGTTCTGCTGAAAGCGTTTCTTCATCTCAAGAGAGAATTGATAGTCTTGTTGAGTCATTCTCAGAAAGAATTTCTACGATGATATATGCAACTCCAATTACACAAGAAGTGCTTCACAAAAGTGGAAAGAGAATTGGGATGAGAACTGTAGCCAAGAAGAAAGGAGGTTGGTGGAAACAATTCTGGTTGCTTCTCAGGCGAGCATGGATGCAGGCTTCCCGCGATGGACCAACAAACAAAGTTCGAGCAAGGATGTCAATCGCATCAGCAGTTATTTTTGGTTCAGTTTTCTGGAGAATGGGAAGATCTCAGACTTCAATACAGGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTTGGGGTGTTTCCAAAGGAGCGTGCAATTGTAGATCGAGAACGTGCAAAAGGCTCCTATTCATTGGGTCCTTATCTGTTTTCAAAATTGTTGGCTGAGAGTCCTATCGGAGCAGCTTTTCCACTGATGTTTGGTGCCATTTTGTACCCTATGGCGCGTCTTCATCCTACTTTACAGAGATTTGGGAAATTCTGTGGCATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACCACTGAAGCAGCCATGGCAGTTGGCCCCTCTCTAATGACCGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCGGAAAATACTCCAATCATCTTCCGCTGGATTCCTCGCGTTTCTCTCATTAGATGGGCCTTTCAAGGACTCTGCATCAATGAATTTAGCGGTCTTCAATTTGAACATCATAATCCATTTGATGTTCAAACAGGAGAACAGGCACTGGAGCGCATATCTTTTGAAGGAAGCAAAATTAGGGATACAGTGGTAGCACAAAGTAAGATACTGTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAGAACAAGCCAAAGTACCAGCAACTTGAGCCACCAGCACTCGATCACAACAAATCGCATTCAAGACTTGAGGAGCTTAATCCTGAACAATCGCATTCAAAACTCGAGGAGCTTAAACCTGAACAAGATGATCAGCCACTTGAAGATGAACCAGAACCAGTGACTAATCAGGTTGATTCAAATCAGGTTGATTCAAATCAAGTTGATCCTGTTGAACCTTTCGTCTCAGAAGGTGCTGAGTAA 2241 0.4498 MVAFGGKKLRQMVSGFGGNGLGQVLAAVAVTVLVRLFSGPGPVLPPETENEDYDDGGEKDDVEEGESEGPVSGNVFAVTIRWSNITLSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGEPSSKRSYKFAYVRQEDLFFSQLTVRETLSIAAELQLPGISSVEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDEPLAYFSKFGHHCPEHVNPAEFLADLISIDYSSAESVSSSQERIDSLVESFSERISTMIYATPITQEVLHKSGKRIGMRTVAKKKGGWWKQFWLLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAESPIGAAFPLMFGAILYPMARLHPTLQRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPRVSLIRWAFQGLCINEFSGLQFEHHNPFDVQTGEQALERISFEGSKIRDTVVAQSKILLFWYCTTYLLLEKNKPKYQQLEPPALDHNKSHSRLEELNPEQSHSKLEELKPEQDDQPLEDEPEPVTNQVDSNQVDSNQVDPVEPFVSEGAE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1554 746 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Lele52g1554 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 326 IPR003439 GO:0005524
Lele52g1554 746 CDD ABCG_EPDR 77 308 - -
Lele52g1554 746 MobiDBLite consensus disorder prediction 48 67 - -
Lele52g1554 746 SMART AAA_5 110 303 IPR003593 -
Lele52g1554 746 Pfam ABC transporter 101 253 IPR003439 GO:0005524
Lele52g1554 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 67 634 - -
Lele52g1554 746 MobiDBLite consensus disorder prediction 687 707 - -
Lele52g1554 746 Gene3D - 76 315 IPR027417 -
Lele52g1554 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 312 IPR027417 -
Lele52g1554 746 MobiDBLite consensus disorder prediction 687 746 - -
Lele52g1554 746 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Lele52g1554 746 MobiDBLite consensus disorder prediction 720 735 - -
Lele52g1554 746 FunFam ABC transporter G family member 7 78 316 - -
Lele52g1554 746 Pfam ABC-2 type transporter 283 340 IPR043926 GO:0140359
Lele52g1554 746 MobiDBLite consensus disorder prediction 41 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1554 Lele-ChrLele52 19460968 19465891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1554 100 304 Calmodulin-binding Proteins AT2G36910 29.187 1.79e-10 62.8