Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1534 ATGTCTATTCTACGCTGCCTAGCTCATCGCTTCCCCCGCCGCGTAAACCTCCGACGCCATCGCTTCGCTTCCGTCGCCGCCGCCGCCGCCGTTAGGCAGGATACCATCGTCTGGAACCCTGCCCCACTCTCCGAGGTTGAACCCGCCGCCGAGTCCCTCTTTCACGTCACTGTCGATTTGTCCGACTCGCCTGATTTGGCAGCATCTCACACGCAGCCCGGGCAGTACCTCCAGTTGCGTGTTCCTGACGCCTCCAAGCCTTCCTTCCTTGCCATCGCGTCGCCTCCGAAGCTCGCTTCGGCGCGTGGCGTGTTCGAGTTTCTTGTCAAGAGCGTGCCGGGATCTACCGCTGAGATTCTATGCGGATTGAAGAAAGGAACTGTGGTGGAACTGAGTCAGCTTATGGGGAATGGGTTCGATACGAGTCGGATTGATCCGCCTGAGAAATATGCGACGGTTTTTATTTTTGCGACCGGATCCGGAATTAGTCCAATTCGATCACTTATTGAGTCTGGATTTAGTGCTGCTGAGAGATCTGATGTGAGGCTCTATTACGGGGCTACAAACCTTCAAAGAATGGCTTATCAGGATAGATTCAAAGACTGGGAATCTTCTGGTGTTAAGATTGTGCCTGTCTTGTCTAAACCAGATGGTAGTTGGACTGGGGAAAGTGGTTATGTGCAGGCTGCTTTTACAAGATCCAAGCAAATTACTAATCCTTTGTCAACCGGTGCTGTACTTTGTGGGCAGAAACAGATGACTGAGGAAGTGACATCTATTCTTATTGCTGATGGAGTCTCAAGGGATAAGATATTGAAGAACTTCTGA 828 0.5145 MSILRCLAHRFPRRVNLRRHRFASVAAAAAVRQDTIVWNPAPLSEVEPAAESLFHVTVDLSDSPDLAASHTQPGQYLQLRVPDASKPSFLAIASPPKLASARGVFEFLVKSVPGSTAEILCGLKKGTVVELSQLMGNGFDTSRIDPPEKYATVFIFATGSGISPIRSLIESGFSAAERSDVRLYYGATNLQRMAYQDRFKDWESSGVKIVPVLSKPDGSWTGESGYVQAAFTRSKQITNPLSTGAVLCGQKQMTEEVTSILIADGVSRDKILKNF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1534 275 Gene3D - 148 275 IPR039261 -
Lele52g1534 275 PRINTS Phenol hydroxylase reductase family signature 71 83 - -
Lele52g1534 275 PRINTS Phenol hydroxylase reductase family signature 154 173 - -
Lele52g1534 275 PRINTS Phenol hydroxylase reductase family signature 179 188 - -
Lele52g1534 275 SUPERFAMILY Riboflavin synthase domain-like 37 139 IPR017938 -
Lele52g1534 275 Gene3D Translation factors 31 136 - -
Lele52g1534 275 PANTHER - 1 275 - -
Lele52g1534 275 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 36 141 IPR017927 GO:0016491
Lele52g1534 275 CDD FNR_like 44 272 - -
Lele52g1534 275 Pfam Oxidoreductase NAD-binding domain 157 257 IPR001433 GO:0016491
Lele52g1534 275 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 146 272 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1534 Lele-ChrLele52 19355416 19359547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1534 52 19355416 19359547 Lele52g1534 52 19355416 19359547 ECH
Lele49g1245 49 8340671 8344388 Lele52g1534 52 19355416 19359547 hybridization
Lele50g1581 50 20977664 20981900 Lele52g1534 52 19355416 19359547 hybridization