Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1521 ATGCCCCCCTCTCACCTTAATTATCCGGACTCTGTTGATTCTTCTCCCCGTTCCCGTAACGCCGACTCCTGGGATGACCCTTTCCCTCCCACTACTGCCTCCTCTCAGCTCCGCCTCATGTGTAGCTATGGCGGTCACATCGTCCCTCGCCCTCACGACAAGTCTCTGTGTTATGTCGGTGGCGATACTCGTATCGTCGTCGTTGACCGGAACACCTCTCTCTCCGACTTTTCTTCGCGCCTCTCTAAAACCTTCCTTAATGGCCGTCCTTTCACTCTCAAATACCAGCTTCCAAGTGAAGACCTCGATTCCTTGATTTCTGTCACTACTGATGAGGATTTTGATAACATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCATCCAGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGTCGCAATCGATTGGGCCTATACTTGATAATTCGGCTAAATCGGATGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGCTCAATAGAGGATTTTCTGAGTCTGGTTCGGTGAATTGCTTGCTGAGTCTCGATGATGAGGCTGGTGGGAATAACCTGGACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACAATCTGGATCTTTCGGGAATGGCAAGAATTTGATGAAGCAAGGACAGGATGTTCACTCTGTGCCTGATTCCCCTATGCTGGAAACGACCTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGTGGATGATAGTAGTGTTAGGATGCAAGATCAGAAGGCGGTCGGAATTGAGGATCAGTTTGCTCAAATGGGTGTTAGTGGTGGTGGGCAGAGACAAGATGAGGGGTTTGTTGTTCTGTCTCCTCCTCCTCCGATGCCGGCGACCATAACAACCCCGATGGTTGTGCCGATCAGCTCCGCCGTTGTTTCTGCCGGCGAATACCAGAATCGGGTTTTCTCCGACGATGAGAGACCAGACTACGGAGTCCCTGTGGGTTACAGGAAACCTATGATACAGCAGCCACAACCACAGCCTCAGGCTCAGCCTCAGAATCTGCCTCCTCAATTTCAACAGAAGTCAACCGGCGTTGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGTGATGGTAGTCTTTCAAATCCATTGTCACGTCTAAAGCCTGTACTCTATCAAGAACAAGTTCAAATCCCCACTGTGACCACAAGGGTTCCTAGTAATCCTACTGATCCGGTAAAGCTTAATATGTCTGATCCTCACACTCGGATCCAGATACAGCAACAGGGGCAGGACCCTGGATATGTATTGCAACGACAATTTGATCCGCAGCAACAACCTCAACAGCAGCAGAAGCAGCAATATATACCAAATTCCCATTTCATTCACCATACCCCTGCCGGCGCGGTGCAAATCCCAGGATACTATCCTGTATATCCTTCCCAGCAACAGTCTCATTCTCAGCATCACCCTCAGCTTGATCAGCAATACCCAGTTTACTACATGCCTGCAAGACAGGCCCAACCTTACAACTTATCAATGCAGCAGCAGCAGCAGCATAATATTGGTGAAACCAACGCAGCCATCCCTTCTAGCCAACCCCATGCTCAGCCAAATCCGACAATGGTTCCATCGTCTGCAGCTTACAATCCTGGAAGAAATGTTCCCATTCCGAAGGCTGAAATGGCTCCTGGCACATACAGAACAAGTGCAGGCATCCCCCAATTAGTTCAAGTCCCTTCTACTCAGCCTCAGCCTCAGCATCAGCATCAGCATCAGCAACAATTTGTTGCTTACTCTCAGATTCATCATCCCTCTCAGACTGCTGCCCCGGCAAATTATGCTTATGACTATGCCGATCCGGCTCATGCTCAGATTTACTACACCCAACCTTTGGCTCCTACCATGCCTTCACAGTACCAAACCATGGCAGCTCCAGCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTTCTGATAGCATAAAGCAGCAGATAAGAACCTCACAGCCAATATAA 2058 0.4937 MPPSHLNYPDSVDSSPRSRNADSWDDPFPPTTASSQLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDFSSRLSKTFLNGRPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESSQSIGPILDNSAKSDDWFLNALNGTGVLNRGFSESGSVNCLLSLDDEAGGNNLDSVSRENEVAQQSGSFGNGKNLMKQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRMQDQKAVGIEDQFAQMGVSGGGQRQDEGFVVLSPPPPMPATITTPMVVPISSAVVSAGEYQNRVFSDDERPDYGVPVGYRKPMIQQPQPQPQAQPQNLPPQFQQKSTGVVDLPSPDSVSSDGSLSNPLSRLKPVLYQEQVQIPTVTTRVPSNPTDPVKLNMSDPHTRIQIQQQGQDPGYVLQRQFDPQQQPQQQQKQQYIPNSHFIHHTPAGAVQIPGYYPVYPSQQQSHSQHHPQLDQQYPVYYMPARQAQPYNLSMQQQQQHNIGETNAAIPSSQPHAQPNPTMVPSSAAYNPGRNVPIPKAEMAPGTYRTSAGIPQLVQVPSTQPQPQHQHQHQQQFVAYSQIHHPSQTAAPANYAYDYADPAHAQIYYTQPLAPTMPSQYQTMAAPAVVLPEVSSQLPSDSIKQQIRTSQPI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1521 685 MobiDBLite consensus disorder prediction 1 29 - -
Lele52g1521 685 MobiDBLite consensus disorder prediction 332 399 - -
Lele52g1521 685 MobiDBLite consensus disorder prediction 199 224 - -
Lele52g1521 685 Gene3D - 56 140 - -
Lele52g1521 685 PANTHER OS05G0427100 PROTEIN-RELATED 7 531 - -
Lele52g1521 685 MobiDBLite consensus disorder prediction 198 229 - -
Lele52g1521 685 SMART PB1_new 51 142 IPR000270 GO:0005515
Lele52g1521 685 ProSiteProfiles PB1 domain profile. 36 142 IPR000270 GO:0005515
Lele52g1521 685 CDD PB1_UP2 40 140 - -
Lele52g1521 685 Pfam PB1 domain 52 141 IPR000270 GO:0005515
Lele52g1521 685 SUPERFAMILY CAD & PB1 domains 52 149 - -
Lele52g1521 685 MobiDBLite consensus disorder prediction 366 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1521 Lele-ChrLele52 19224267 19226490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1521 36 185 MAP Kinase Kinase Kinase AT3G46920 39.869 2.09e-26 114