Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1510 ATGAGTAGTAATGGTAAATCTCATGGTGGTAATCAAAGCACTAGAGATGTCATCTGCAACGCCGGTGCTGGAGCTGCTGCTGGGGCTATTGCTGCTACATTTGTTTGTCCGCTGGATGTAATCAAGACGAGACTACAAGTTCATGGTCTTCCTCCTGGGCACAAAGGTAGTTTCATCATCACAAGCTTGCGGGATATAGTCAGGAATGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATAATAGCATTACTTCCAAACTGGGCAGTGTACTTCTCAGTTTATGGTCAACTGAAAGGCCTTTTCTTTTCACAAGATGGTTGCAACCAATTATCAACTGTTGAAAATATGTTAGCTGCTGCTGGTGCTGGTGTAGCAACAGCAATTTCAACAAATCCGTTGTGGGTTGTTAAGACCAGACTCCAAACACAAGGAATGAAGTCCGATGTTGTTCCGTACAAAAGCATTCTTTCTGCTTTGAAGAGGATAATGCACGAGGAAGGCATACGAGGACTGTATAGTGGCATAGTGCCTTCCTTGGCTGGTATAAGTCATGTTGCAATTCAATTCCCTGCATATGAAAAGATCAAGTCATACCTGGCCAAAAGGGATGATACAACTGTTGACAAACTTGGTCCAGGAAGGGTTGCCGTTGCATCCTCAATTTCAAAAGTCATTGCGTCTGTAATGACTTATCCACATGAGGTGATACGTTCGAGGCTGCAGGAGCAAGGCCAGGCGAAAAGTGCCAGGGTCCGGTATGCTGGGCTTGTTGACTGTTCTAGGAAGGTTTTCCATAGCGAAGGCCTTCCCGGCTTCTATCGAGGTTGTGGGACAAACTTACTAAGAACAACACCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTCCTGCAACGTGTTGTACCTCAGGATATAGGGCACTCACAAGGGTCTCATGCACCAGATGACCTTAGCAAGCCCCAGCCGAAAGACAGTGAGATAAAATTACCATCTTAG 1017 0.4553 MSSNGKSHGGNQSTRDVICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGHKGSFIITSLRDIVRNEGFRGMYRGLSPTIIALLPNWAVYFSVYGQLKGLFFSQDGCNQLSTVENMLAAAGAGVATAISTNPLWVVKTRLQTQGMKSDVVPYKSILSALKRIMHEEGIRGLYSGIVPSLAGISHVAIQFPAYEKIKSYLAKRDDTTVDKLGPGRVAVASSISKVIASVMTYPHEVIRSRLQEQGQAKSARVRYAGLVDCSRKVFHSEGLPGFYRGCGTNLLRTTPSAVITFTSFEMIHRFLQRVVPQDIGHSQGSHAPDDLSKPQPKDSEIKLPS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1510 338 MobiDBLite consensus disorder prediction 324 338 - -
Lele52g1510 338 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lele52g1510 338 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Lele52g1510 338 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lele52g1510 338 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lele52g1510 338 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Lele52g1510 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Lele52g1510 338 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Lele52g1510 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Lele52g1510 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Lele52g1510 338 MobiDBLite consensus disorder prediction 312 338 - -
Lele52g1510 338 Pfam Mitochondrial carrier protein 18 106 IPR018108 -
Lele52g1510 338 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Lele52g1510 338 Pfam Mitochondrial carrier protein 214 306 IPR018108 -
Lele52g1510 338 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Lele52g1510 338 Gene3D Mitochondrial carrier domain 3 108 IPR023395 -
Lele52g1510 338 Gene3D Mitochondrial carrier domain 109 313 IPR023395 -
Lele52g1510 338 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 309 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1510 Lele-ChrLele52 19109418 19112314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1510 1 323 Chloroplast and Mitochondria Gene Families AT1G25380 66.667 8.99e-146 414