Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1509 ATGTTTCATAGTCAGCAAAGCTACTTTGTCTCTCCTCTTTCCCTCAAATGTATGGAGGCTAGCTTGACACCAAGTTCCCAAGGCATGTGCTTTGGTGCTGTCCTTTCTGACAGATCTGCGTCTGATTTCCGGAGCACGCAGACAGACATTCTCGCGGGTAATTCAGCTACATTAATTCTTTTCTTTGGAATTTTTGTTTTCTGTTTGGCTGTTTTAAAAGACCATGGCACAAGCTTCAAGTTGTTTTTTCTCGGAATTAATACAAGTAGTGTTAACTTTGGAACTTCAAATGTCATTTTCCATGAAGTTCGGTGGAAGCCAAGCTTACTAAATTTGAGATATTGGTCTGAGAGAAAGGCATTGGTGGCCAAGTTATGGCGTCTGGTAGAGGGAGGCGTCACCATCATAATCTTGTGCCTTGTTGCATTGATAAGAAGGGAGATTAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGGTATGGACATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTTTAATAAAGACCGATTGTCAGCGAATACCTGGAAATTCTTCGTCAGCATTTTCTGTATATGCGATCTTTGATGGTCACAATGGAAATGCAGCAGCAATTTTTAGTAGGGAAAATTTGTTAAATCACATTTTGGGGGCTCTTCCTCGAGGTATTGGAAGAGAGGAGTGGCTTCATGCATTACCTAGGGCATTGGTTGCTGGGTTTGTCAAGACTGACAAGGAGTTCCAGAGCAGAGGAGAAACTTCTGGCACCACAGCCACGGTTGTGATAGTCGATAGATGGACTGTGACGGTTGCATCGGTGGGAGATTCCCGTTGTATACTAGACACCCAAGGTGGCCCCATTACCAACTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGCGAGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGAAGGCTTAGTATTTATGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCAGGGGGTCTGTGCCTTTCTAGGTCAATTGGAGATGTGGATGTCGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTGTCAAAAGCTGGTGGGAGGCTTATAATTGCTTCTGACGGCATCTGGGATGATCTATCCTCAGAAATGGCAGCGAAATCTTGTCGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAAGTTGTGAAGGAAGCATTAAGGACGAGAGGTTTAAAGGATGATACAACTAGCATAGTAGTTGGCATAATTCCTCCTGATAATGGATTGCCACTGCTTCCGCCCCTAAAAAAGCAGAGTAAATTGAGATCTTTACTATTCAGGAAGAAATCCAGTGATTCCACTAGTAAGCTGTCGAAGAGGCTTTCGGCTGTTAATATAGTAGAGGAACTGTTTGAAGAAGGATCAGCAATGCTCGCTGAAAGATTAGCGAATGAAGGGAATTCAGGGGAACCATCAACCTCAGGGATATTTGTATGCGCAGTGTGCCAGATAGATATTGCTTCAAGTGAAGGCATATCTGTTCATGCAGGCTCCATTTTCTCGACCAGCTCTAAGGCATGGCAAGGCCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAGGACGCTATGGAAGGCAAGCGCCCTAGTGGAATTAGAGTCTCATAG 1662 0.4446 MFHSQQSYFVSPLSLKCMEASLTPSSQGMCFGAVLSDRSASDFRSTQTDILAGNSATLILFFGIFVFCLAVLKDHGTSFKLFFLGINTSSVNFGTSNVIFHEVRWKPSLLNLRYWSERKALVAKLWRLVEGGVTIIILCLVALIRREIKSEKMEKPTVRYGHAAQSKKGEDYFLIKTDCQRIPGNSSSAFSVYAIFDGHNGNAAAIFSRENLLNHILGALPRGIGREEWLHALPRALVAGFVKTDKEFQSRGETSGTTATVVIVDRWTVTVASVGDSRCILDTQGGPITNLTVDHRLEENIEERERVTASGGEVGRLSIYGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDDLSSEMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTSIVVGIIPPDNGLPLLPPLKKQSKLRSLLFRKKSSDSTSKLSKRLSAVNIVEELFEEGSAMLAERLANEGNSGEPSTSGIFVCAVCQIDIASSEGISVHAGSIFSTSSKAWQGPFLCADCRNKKDAMEGKRPSGIRVS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1509 553 PANTHER PROTEIN PHOSPHATASE 160 419 - -
Lele52g1509 553 CDD PP2Cc 160 419 IPR001932 -
Lele52g1509 553 SMART PP2C_4 151 419 IPR001932 -
Lele52g1509 553 ProSiteProfiles PPM-type phosphatase domain profile. 152 421 IPR001932 -
Lele52g1509 553 SUPERFAMILY PP2C-like 160 420 IPR036457 -
Lele52g1509 553 Pfam Protein phosphatase 2C 185 406 IPR001932 -
Lele52g1509 553 SMART PP2C_SIG_2 175 421 IPR001932 -
Lele52g1509 553 Gene3D - 158 424 IPR036457 -
Lele52g1509 553 FunFam probable protein phosphatase 2C 5 159 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1509 Lele-ChrLele52 19101463 19105386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1509 137 552 PP2C-type Phosphatase Gene Family AT1G68410 76.850 0.0 652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1509 52 19101463 19105386 Lele52g1509 52 19101463 19105386 ECH
Lele50g1553 50 20728085 20731430 Lele52g1509 52 19101463 19105386 hybridization