Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1507 ATGATTTCACTTTACAGATCTCGCTTCCTCTTGTATTCTGAACTGGCACTGCTATTCCTAGCTGGACATGGAAATGGAAACCATGAAAAGTGTCCTCAATCATTTGATTGTGGAGAACTTGGGAAGATCCACTTCCCTTTCACCAAGGCGGAAACACAGGATTGTGGCTTAATGATGATACATGGTTGTGATGATCCATCTTCGAACAAAACGATTCAACTAGAGAAGAATGGAAGGCCATTAAAGCTTACAAGCATCATTCAGCAGGAGGATAATTATATTACTGTTACTGATATAGATCTGCAAAAGAGGTTGAAATCCAAAACTTGTCAAGTTTTCAACAAGAATATCACTCTTCCTCATGGCTCTCCTTTGGTTTCTTTTCATATCAAACAAAGCATAACCTTGTTCAGATGTGATCACAGCCTCATCATCAGCCCTCCGGCTAGTGTTGATAATTATACCTGCCATAACTATAATATCTATCATTACCACTTGCACAAGCATCATCCTCTTAATCATTATTACCGAAGATCTTTCTCAGCTTGCTCTATTCTTCTGCTTCCAAGTAAACACCAGAATCACACCAAAGACCTTTTCTCATTCTTAACTGCTCAAATGGTTATTCAAGTACAATTATCTGATGCTTGTGATAAGTGTTACAACCAAATAGGTGGCCAATGTCGACTAGACAGCAATAGGAACTTCTATTGTCACAGAGAGAAAACTGGAAAAACTGTGCTCATTGCAACAACAGTAGCTTCTTCTGTGGGACTCGTTATGCTATTGTTCCTGGCCTTTTGCTTTAGAAGAAAGCTTCTTGCTCTTGCTTCATCAAGTCTCTTTTGGAGGAAAAAGCATCAAACCCATCAAATAACTGAAGCCTCTCTTAAACAACACGGACCAATCTCTTCCAGAAAGTACAGTTACTCTGAGATAAAGAAAATCACAGACTGTTTCAGAATCAAATTAGGCAAAGGAGGATATGGAACTGTATATAAAGGGAAGCTACCAAATGGGCATCTTGTCGCAGTGAAAGTGCTAAGTCAACTAAAATGTACCGACAAGGAATTCATTAATGAAGTTGCAAGTATCAGCAAGACATCTCATGTTAACATTGTTAGCCTTCTAGGCTTTTGTTTCCAAGGTTCCAAAAGAGCTCTAGTTTACGAGTTTATGTCCAATGGATCTCTCGAAAAATTCATATATGAGAAGAATTGCAACATGGGTGAACAACACCAATTGGACTGTCAAACTCTATATAATATTGCCCTTGGTGTTGCTAGAGGATTAGAGTACTTACACAGGGGCTGCAACAAGACCAAAATCCTACATCTTGACATAAAACCTCATAACATCCTACTCGATGAGGAGTTTTGCCCAAAAATTTCGGATTTTGGACTCGCTAAAGTACTTCCAATAAAAGATCGGATTGTGTCCATTTTGGAAGCAAGGGGTACTGTAGGATACATAGCTCCTGAAGTATTTTCGAGAAACTTTGGTAACGTATCTCACAAATCGGATGTCTTCAGTTATGGAATGGTGGTCCTAGAAATGGTAGGAGGAAGAAGGAACGTGAATGTTGAAGTTGATCGTTCTAGTGAGGCATATGTTCCACAATTGATTTATAAGCGCCTTGAACTGAATCAAGAACTAGAACTGGGGTGCAATATTAAGAACGATAGTGATAAAGAAATGATGAGAAAAATGACAATGGTGAGCTTATGGTGCATACAAACTGATCCTTCAATGAGACCAGAAATGAGTAAAGTAGTGGAGATGTTAGAAGGAAGCTCGGAATCATTGCAAGTACCTCCTAAGCCATTTTTCTTTTCTTCTTCAGCATCTTCTGTTCATTCCACATCTAAAACATGTGAGATTGTGCAGTTGTAG 1893 0.3883 MISLYRSRFLLYSELALLFLAGHGNGNHEKCPQSFDCGELGKIHFPFTKAETQDCGLMMIHGCDDPSSNKTIQLEKNGRPLKLTSIIQQEDNYITVTDIDLQKRLKSKTCQVFNKNITLPHGSPLVSFHIKQSITLFRCDHSLIISPPASVDNYTCHNYNIYHYHLHKHHPLNHYYRRSFSACSILLLPSKHQNHTKDLFSFLTAQMVIQVQLSDACDKCYNQIGGQCRLDSNRNFYCHREKTGKTVLIATTVASSVGLVMLLFLAFCFRRKLLALASSSLFWRKKHQTHQITEASLKQHGPISSRKYSYSEIKKITDCFRIKLGKGGYGTVYKGKLPNGHLVAVKVLSQLKCTDKEFINEVASISKTSHVNIVSLLGFCFQGSKRALVYEFMSNGSLEKFIYEKNCNMGEQHQLDCQTLYNIALGVARGLEYLHRGCNKTKILHLDIKPHNILLDEEFCPKISDFGLAKVLPIKDRIVSILEARGTVGYIAPEVFSRNFGNVSHKSDVFSYGMVVLEMVGGRRNVNVEVDRSSEAYVPQLIYKRLELNQELELGCNIKNDSDKEMMRKMTMVSLWCIQTDPSMRPEMSKVVEMLEGSSESLQVPPKPFFFSSSASSVHSTSKTCEIVQL 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1507 630 PANTHER RUST RESISTANCE KINASE LR10-RELATED 288 617 IPR045874 GO:0004672
Lele52g1507 630 FunFam S-receptor-like serine/threonine-protein kinase 285 392 - -
Lele52g1507 630 Gene3D Transferase(Phosphotransferase) domain 1 393 605 - -
Lele52g1507 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Lele52g1507 630 SMART serkin_6 318 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1507 630 ProSiteProfiles Protein kinase domain profile. 318 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1507 630 Gene3D Phosphorylase Kinase; domain 1 278 392 - -
Lele52g1507 630 Pfam Protein kinase domain 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1507 630 FunFam PR5-like receptor kinase 393 607 - -
Lele52g1507 630 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Lele52g1507 630 SUPERFAMILY Protein kinase-like (PK-like) 306 620 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1507 Lele-ChrLele52 19086851 19089241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1507 209 608 Receptor kinase-like Gene Family AT5G38260 48.049 1.50e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele52g1507 Pkinase 5.7e-46 CL0016