Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1441 ATGAAATCGATGATGAAAATAAAGGAAGATCAAGGGCAGTGTTCTTCATCTTCTCAGGCCATGAATAACATTCAGAACTATCAAGAACAGCTTCTTCTTCATCAAATGATGCAGCAGCAGCAGCAAAACTTTGACGTTTTCGGAGGTAATTCTTCTTCTAATAATACTAATAACGCGAGAGGATTGATGTTCCCTGAGGTTTCTCCAATCTTTCATCCGCCGCCGCCTCCACAGCCGCCATGGTCTCTCCCTCCTGTTCACTCGTTCAACCCGGTCCGAGGAGACACCGGCGACCACCAGTTTTTGGTCCCTCCAGTACCTTCTTCCTCCTCTTCGCTCTACGCGGGCCTCTTCAACCGGAGGGTTCCTTCTCCGCAGTTCGCTTACGATGGTCCATCCAATTCCGATCACCATCACCATCTCCGGATCATCTCGGACACCCTCGGGGTTGGACCCGCCGTCGTGGGTCAACCCGGCTCAGCAGCTCCATTCGGCCTCCAAGCCGAGCTGGGAAGGATGACGGCTCAAGAAATCACAGACGCCAAAGCTCTCGCGGCTTCAAAGAGCCACAGCGAAGCCGAAAGAAGACGCCGAGAGAGAATCAACAACCATCTCGCCAAGCTTCGAAGCTTATTGCCCAACACAACCAAAACAGACAAAGCTTCGTTATTAGCAGAAGTAATCCAGCATGTGAAGGAGCTGAAGCGTCAAACTTCAATAATAGCAGAAACAAGCCCAGTGCCCACGGAAACCGACGAGTTGACGGTGGACGACGCTTCCGATGAGGACGGCAGGTTCGTGATCAAAGCCTCGCTTTGCTGCGAAGATAGGTCCGATCTCTTGCCGGACCTCATCAAGACGTTGAAGGCCCTAAGGTTGAGAACCGTCAAGGCGGAGATCACCACGCTCGGAGGACGCGTTAAGAACGTCTTGTTCGTCACCGGCGAAGAAGATGAGTTGAATAATGGCGGCGGTGGGGGCGGCGGTGAGGAGCAGAGACAGCATCAGCATTGTATAAGCTCCATACAAGAGGCTTTGAAGGCAGTGATGGAGAAGAATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAGAATGGGAATGTTAAGAGGCAAAGAACTAATAATAATATCAATATCCTGGAACAAAACAGGTCTTTATGA 1161 0.5134 MKSMMKIKEDQGQCSSSSQAMNNIQNYQEQLLLHQMMQQQQQNFDVFGGNSSSNNTNNARGLMFPEVSPIFHPPPPPQPPWSLPPVHSFNPVRGDTGDHQFLVPPVPSSSSSLYAGLFNRRVPSPQFAYDGPSNSDHHHHLRIISDTLGVGPAVVGQPGSAAPFGLQAELGRMTAQEITDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTETDELTVDDASDEDGRFVIKASLCCEDRSDLLPDLIKTLKALRLRTVKAEITTLGGRVKNVLFVTGEEDELNNGGGGGGGEEQRQHQHCISSIQEALKAVMEKNGGGGGGGGGGENGNVKRQRTNNNINILEQNRSL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1441 386 FunFam transcription factor bHLH30 180 243 - -
Lele52g1441 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Lele52g1441 386 Gene3D - 180 241 IPR036638 GO:0046983
Lele52g1441 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 241 IPR036638 GO:0046983
Lele52g1441 386 Pfam Helix-loop-helix DNA-binding domain 188 234 IPR011598 GO:0046983
Lele52g1441 386 CDD bHLH_AtAIG1_like 180 257 - -
Lele52g1441 386 MobiDBLite consensus disorder prediction 351 386 - -
Lele52g1441 386 MobiDBLite consensus disorder prediction 367 386 - -
Lele52g1441 386 PANTHER TRANSCRIPTION FACTOR BHLH30 41 379 IPR045847 GO:0003700|GO:0006355
Lele52g1441 386 SMART finulus 191 240 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1441 Lele-ChrLele52 18354128 18357599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1441 17 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.693 2.45e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele52g1441 HLH 2.7e-12 No_clan