Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1423 ATGAAAGGTGGAAAAAGAAGGAAGCTGCATTTCAGCAAGATCTACTCATTCGCATGCGGGAGACAATCATTTGAGGACGACCATTCACAGATTGGGGGACGAGGTTATTCCAGGGTGGTCTTCTGCAATGAACCAGACGTCCTTGAAGCTGAAATTCGAGATTATGCTGATAACTCCGTGAGGTCTACAAAATATACTCTTGCTACTTTCTTGCCTAAATCACTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTCTATTTCTTAGTTACTGGGACCTTAGCCTTCACCCCACTTGCTCCCTACATAGCGGTTAGTGCCATCGTTCCTCTGATCATCGTTATTGGGGCATCAATGATTAAAGAAGCTATTGAAGATTGGCGGCGGAAGAAGCAGGATATTGAGGTGAACAATAGACTGGTAAAAGTGCATAAAGGTGATGGTGTATTTGAATATACTGCATGGAAGAATCTGAGGGTGGGAGATATAGTGAAGGCAGAGAAGGATGAATTCTTTCCAGCAGACCTCCTATTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACCATGAATTTGGATGGGGAGACAAATTTAAAGCTGAAACAAGGGTTGGAGGTAACTTCTTCCTTGCACGAGGATCTCTACTTCCGTGATTTTAAAGCTACAGTTAAATGTGAAGACCCAAATGCCAACTTATACTCTTTTGTTGGGAGCATTGAGTTTGAAGATAAACAATATCCCCTTTCTCATCAACAACTTCTCCTGAGAGATTCTAAACTCCGTAATACAGACTTCATATTTGGAGCTGTCATTTTCACTGGTCATGACACCAAGGTTATTCAAAATTCTACTGATCCCCCTTCAAAGAGAAGCAAGGTTGAGAGGAAGATGGATAAAATAATCTATTTCTTGTTTTGTATTCTTTTTCTAATGGCATCTGTTGGATCTATTTTCTTTGGAATTTTAACTAAAGATGACTTGGAAAATGGGTTGATGAAAAGATGGTATCTCAGACCAGATAATTCTACAATTTTCTTTGATCCAAAAAGATCACCATCGGCTGCAATTTTTCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCAATCTCCTTGTATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGCGTCTTCATCAATCAAGATATCCATATGTACTATGAGGAGGCAGACAAACCAGCCCATGCCCGTACTTCAAATCTGAATGAAGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGTACTTTGACCTGCAACTCAATGGAGTTCATTAAATGTTCTATCGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTGGAAAAAGCTATGAATAAAAAAAGTGGTTCACCATTGATTCATGAGCAAGATAGTGGATCAGATGATGTCAGGGATTCTTCTGTTACAAAAGCCCCCATCAAAGGTTTTAATTTTATAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTCATGCGGATGTCATCCAGAAGTTTTTTCATTTACTGGCAACCTGTCATACAGCCATCCCTGAAGTGGATGAAGACACTGGAAATATCTCATATGAAGCCGAGTCCCCAGATGAAGCAGCCTTTGTGATTGCAGCAAGAGAACTTGGCTTTGAATTCTACAAAAGAACTCAGACAAGTTTATCAATGTATGAGTTGGATCCTGTTTCTGGCAAAAAGGTCGAAAGGTTGTATAAGCTTCTCAATGTTTTAGAATTCAACAGCTTGAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGCAAAATTTTTCTATTCTGTAAGGGTGCTGACAGTGTCATGTTTGAAAGGCTGGCCAAGAATGGGCGGGAGTTTGAAGAGAAAACCCTTGAACATGTGCAAGAGTATGCTGATGCAGGTCTAAGGACCTTGATATTGGCCTATCGTGAACTTGATGAAGAAGCATACAGGGACTTCGATGAAAAATTTTCTCTGGCCAAGAATTCAGTTCATGCAGATCGGGATACACTGATTGATGAAGTATCAGATAAGATTGAGAGGAACCTAATCCTTCTTGGTGCCACTGCAGTAGAGGACAAACTCCAAAATGGGGTTCCTGATTGCATTGACAAACTTGCTCAGGCAGGAATCAAGATTTGGGTTCTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATCTGGATTCTCCAGATATTCAAGCATTAGAAAAGGCTGGAGACAAGATTACTATTGCCAAGGAATCTAGGGAGAATATCCGATGTCAGATATCTGAAGCTACTGCACAACTTGCTGTTTCCAGAGGGACTTCTCAGCAAGCATTTGCTCTGATCATCGATGGAAAATCACTTACATATGCTCTTGACGATGACATGAAGAACATATTTCTGGAGCTTGCACTTAATTGCGCGTCAGTTATCTGCTGTCGGTCATCACCAAAGCAGAAAGCACTAGTTACCAGACTTGTTAAATCTGGAACTGGCAAAACGACACTAGCCATCGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATTAGCGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCAATTGCCCAGTTCAGGTACTTGGAACGGTTACTCCTCGTGCATGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATGTTACTTTTGGATTCACCCTCTTCTTGTATGAAGTGTATGCATCGTTCTCTGGAACACCTGCGTACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTCTCATCTCTTCCTGTTATTGCTCTTGGCGTATTTGACCAGGATGTTTCTGCCCGGTACTGTCTTAAGTTTCCTCAGTTATATCAACAAGGAGTGCAGAATGTCCTCTTTAGCTGGCGCCGAATTCTTAGCTGGATGCTGAATGGATTCATAAGTGCAATCATAATTTTCTTCTTCTGCACAAAGGCGATGGAGCTTCAGGCCTTTGATAAGGAGGGAAGAACAGCCGGCAGGGATATACTCGGAGTAACCATGTATACCTGCATTGTATGGGTTGTAAACTTGCAGATGGCACTTGGCATAAGTTACTTCACCATGATTCAACATATGTTCATCTGGGGCACCATTGCTTTCTGGTATCTTTTCCTCCTGATATATGGAGCAATGCCGCCGGGGTTTTCCAAGAATGCCTACTATGTCTTCATTGAAACGCTGGCCCCATCTCCCATGTTCTGGCTTGTGACTTTCTTTGTGGTGATCTCAACCTTAATACCTTACTTCTCTTACTCAGCACTTCAGATGAGGTTCTTTCCCATGTACCATGAAGTGATACAATGGTTAAGGTATGAGGGGAAGGCGAATGATCCAGAATATTGCGCCTTACTGAGACAGAGATCATTGGGGCGAGTAACCGTCGGTTCAACAGCACGCTTAGAAGCTAAGAAGGCTAACCACCATAAAACCAGAACTTCTAAACATAGATGA 3597 0.4145 MKGGKRRKLHFSKIYSFACGRQSFEDDHSQIGGRGYSRVVFCNEPDVLEAEIRDYADNSVRSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTPLAPYIAVSAIVPLIIVIGASMIKEAIEDWRRKKQDIEVNNRLVKVHKGDGVFEYTAWKNLRVGDIVKAEKDEFFPADLLLLSSSYEDAICYVETMNLDGETNLKLKQGLEVTSSLHEDLYFRDFKATVKCEDPNANLYSFVGSIEFEDKQYPLSHQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCILFLMASVGSIFFGILTKDDLENGLMKRWYLRPDNSTIFFDPKRSPSAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSVFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNKKSGSPLIHEQDSGSDDVRDSSVTKAPIKGFNFIDERIMNGNWVNEPHADVIQKFFHLLATCHTAIPEVDEDTGNISYEAESPDEAAFVIAARELGFEFYKRTQTSLSMYELDPVSGKKVERLYKLLNVLEFNSLRKRMSVIVKDEEGKIFLFCKGADSVMFERLAKNGREFEEKTLEHVQEYADAGLRTLILAYRELDEEAYRDFDEKFSLAKNSVHADRDTLIDEVSDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIIIHLDSPDIQALEKAGDKITIAKESRENIRCQISEATAQLAVSRGTSQQAFALIIDGKSLTYALDDDMKNIFLELALNCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPQLYQQGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDKEGRTAGRDILGVTMYTCIVWVVNLQMALGISYFTMIQHMFIWGTIAFWYLFLLIYGAMPPGFSKNAYYVFIETLAPSPMFWLVTFFVVISTLIPYFSYSALQMRFFPMYHEVIQWLRYEGKANDPEYCALLRQRSLGRVTVGSTARLEAKKANHHKTRTSKHR 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1423 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lele52g1423 1198 Gene3D - 542 699 IPR023299 GO:0000166
Lele52g1423 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1155 - -
Lele52g1423 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lele52g1423 1198 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Lele52g1423 1198 Gene3D - 118 286 - -
Lele52g1423 1198 FunFam Phospholipid-transporting ATPase 116 286 - -
Lele52g1423 1198 MobiDBLite consensus disorder prediction 462 481 - -
Lele52g1423 1198 Gene3D - 700 904 IPR023214 -
Lele52g1423 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1142 IPR023298 -
Lele52g1423 1198 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Lele52g1423 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 701 IPR023299 GO:0000166
Lele52g1423 1198 FunFam Phospholipid-transporting ATPase 699 904 - -
Lele52g1423 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele52g1423 1198 SUPERFAMILY HAD-like 419 919 IPR036412 -
Lele52g1423 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1013 - -
Lele52g1423 1198 FunFam Phospholipid-transporting ATPase 541 699 - -
Lele52g1423 1198 SFLD C1.7: P-type atpase like 406 915 - -
Lele52g1423 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Lele52g1423 1198 Pfam Cation transport ATPase (P-type) 538 625 - -
Lele52g1423 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g1423 1198 Pfam Phospholipid-translocating ATPase N-terminal 41 104 IPR032631 -
Lele52g1423 1198 SFLD p-type atpase 406 915 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1423 Lele-ChrLele52 18121849 18128702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1423 1 1186 Primary Pumps ATPases AT1G68710 74.323 0.0 1906