Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1418 ATGTTTGGTGGGGATGATGGCAAAGAAGGGAGTGGGGTTGTTTCATATTTAGATGCTGGTCGTGGTGGAAGAGAATTTGGTGATAGTAATAATGATTTCCTCAAGTTTTCCCATGATTTGGGTCCTAATAAAGGCAGATCAAAGGGAGGAGGAGGAAGAGGAAGCAAAAGGGTTAGACAGGTCACTATTGAGAAGAAAAGGAGAGTGGATTTTACCAGCAAATTTGATGCCTTAAAAGAGCTCATCCCAAATCCCACCAAGAATGATAGAGCATCTCTGCTTTGTGGTGCTATTGAGTACATCCAAAAGCTTCGTAGATCCGTTAACAATTTCACATTATTAGTTAACAAAAAGAGATCGAGTGGGAAAGAAAGGATGATCAAGAGGCACAAGGTTGAGGAAGGAGAACAAGAAGATAAAGAAGAAGCTTTAGGGGACTTGGAGAGCTGCAACTTGAAGCCGCTCAGTGAAGAACCAGATCATCATCATCATCATCAACAACAACAACTTCTTCCAATCAATAGATGCATAATTAGGGGCACTTGGCTTCAGAAGAAATCTGAAGACACAGAGGTTGATGTCCGAATCGTTGATGACGAAGTGACAATCAAGCTTGTGCAGAGAAAGAACACTAACTGCTTGCTGTATGCTTCCAAGGCTCTGGATGAACTTGAGCTTGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTTTTTGTTCAACCGCAAGGTTAGTGATGAGAATAGATATGATTCTATGAATCTTATGAATCTTAATTAA 792 0.4116 MFGGDDGKEGSGVVSYLDAGRGGREFGDSNNDFLKFSHDLGPNKGRSKGGGGRGSKRVRQVTIEKKRRVDFTSKFDALKELIPNPTKNDRASLLCGAIEYIQKLRRSVNNFTLLVNKKRSSGKERMIKRHKVEEGEQEDKEEALGDLESCNLKPLSEEPDHHHHHQQQQLLPINRCIIRGTWLQKKSEDTEVDVRIVDDEVTIKLVQRKNTNCLLYASKALDELELDLQHVAGGHIGDFCSFLFNRKVSDENRYDSMNLMNLN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1418 263 Pfam Helix-loop-helix DNA-binding domain 56 104 IPR011598 GO:0046983
Lele52g1418 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 112 IPR036638 GO:0046983
Lele52g1418 263 MobiDBLite consensus disorder prediction 37 57 - -
Lele52g1418 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 55 104 IPR011598 GO:0046983
Lele52g1418 263 SMART finulus 61 110 IPR011598 GO:0046983
Lele52g1418 263 PANTHER TRANSCRIPTION FACTOR BHLH91 25 250 IPR045895 GO:0006355|GO:0048658
Lele52g1418 263 Gene3D - 53 112 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1418 Lele-ChrLele52 18084013 18085264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1418 52 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 49.246 5.82e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele52g1418 HLH 9.8e-10 No_clan