Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele52g1417 | ATGACTAGTCTTGCAGTAATCACCAGATTTTCCATTCAACTATTCAGCATGCTCTTCAACTTCCTCAAGCTAGCTTATCAAGCTTTCAAATGGTTCTTAGACTTCCTTCTCTACCACCCATTTTACAGCCTTCATGTTCATCATCATCATCAACAACCTCTTCATCATGAGTTTCAGATGGTTACAGAAGATCGAGTAGAAATATGGCGTCCTCGTCTTCATGAAGGAGGAGGAGAAGAAGAAGAAGTGGATTGTGTTGTGTGTCTGAGCAAGATTGGTGAAGGAGAAGAAGTTAGAGTGCTGAGGTGTGAACATGTTTTTCATAGAGATTGTTTGAATCAATGGGTTGAATTTAGGAACTATACTTGTCCTCTTTGTGGGGACTTTCTGGGTTGTGGGATTAGGAGTGTTGTTCATGGTTGGGGAGGAACAACCGATGAGATTCTCTTTAGGTTTTCTTCTTCTTCTTGGTAA | 474 | 0.4072 | MTSLAVITRFSIQLFSMLFNFLKLAYQAFKWFLDFLLYHPFYSLHVHHHHQQPLHHEFQMVTEDRVEIWRPRLHEGGGEEEEVDCVVCLSKIGEGEEVRVLRCEHVFHRDCLNQWVEFRNYTCPLCGDFLGCGIRSVVHGWGGTTDEILFRFSSSSW | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele52g1417 | 157 | Pfam | Ring finger domain | 84 | 126 | IPR001841 | - | |
Lele52g1417 | 157 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 129 | IPR013083 | - | |
Lele52g1417 | 157 | SUPERFAMILY | RING/U-box | 79 | 130 | - | - | |
Lele52g1417 | 157 | SMART | ring_2 | 85 | 126 | IPR001841 | - | |
Lele52g1417 | 157 | PANTHER | - | 17 | 126 | - | - | |
Lele52g1417 | 157 | ProSiteProfiles | Zinc finger RING-type profile. | 85 | 126 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele52g1417 | Lele-ChrLele52 | 18077466 | 18077939 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele52g1417 | 84 | 130 | C3H Transcription Factor Family | AT1G15100 | 63.830 | 3.28e-15 | 67.0 |