Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1394 ATGGCAACAGCGAAACCTTATTCCTTTCGTAATTTGAACAATGTTCATCATCATCATCTCAATAAGATTACTGTTAGCTTTGTTCTTGTTGTTCTTCTTGTTGTTCTTTCTAGTAGATGTGAGGCTTCTGAACTGAGACTTGATTACTATGCTTCGTCTTGCCCTACTGTGTTTGATGTTATACGCAAGGAAGTGGAGTGTGCTGTGCAGTCCGATCCTCGTAATGCAGCCATGCTTCTTCGTCTTCACTTCCATGACTGCTTTGTCCAGGTTGGTGGACCTTATTGGGATGTTCCAGTGGGAAGGAAGGATTCAAAAACAGCAAATTTTGCACTTGCCAACACCAACCTTCCAAAACCAGATGACAGCCTTCTCTCCATAATTTCCAAGTTTATCTATCAAGGCCTCTCAGTTACTGATATGGTTGCTCTTTCAGGAGCTCATACGATTGGCATGGCGCGGTGTGAGAGTTTCCGATTGAGGATTTACAGTGACTATGAGTTGACGTCGGAGAAAGACGCCATCTCTGAGAATCACCTGAAAGAGCTGAAATCAATGTGTCCACTAACAAAAGAAGGATCATCATCAGAAAATAATGTAACAGCAATGGACTATATTACCCCTAACCTTTTTGATAATTCTTACTACCTCTTGCTTCTGAAGGGCCAGGGATTGCTTAACTCAGATCAAGAACTGTATTCAAGTGTGTTTGGGATTCAAACCAGAGAGCTTGTTAAGAAGTATGCTTTGGATCCTCTTGCTTTTTTCCAGCAATTCTCAGATTCAATGGTGAAGATGGGCAATATTGTCAAACCTGAAAGCTTTGCTGATGGAGAAGTTAGGACGAATTGCAGATTTGTTAACACTTGA 870 0.4138 MATAKPYSFRNLNNVHHHHLNKITVSFVLVVLLVVLSSRCEASELRLDYYASSCPTVFDVIRKEVECAVQSDPRNAAMLLRLHFHDCFVQVGGPYWDVPVGRKDSKTANFALANTNLPKPDDSLLSIISKFIYQGLSVTDMVALSGAHTIGMARCESFRLRIYSDYELTSEKDAISENHLKELKSMCPLTKEGSSSENNVTAMDYITPNLFDNSYYLLLLKGQGLLNSDQELYSSVFGIQTRELVKKYALDPLAFFQQFSDSMVKMGNIVKPESFADGEVRTNCRFVNT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1394 289 ProSitePatterns Peroxidases proximal heme-ligand signature. 140 150 IPR019793 -
Lele52g1394 289 ProSiteProfiles Plant heme peroxidase family profile. 57 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 Pfam Peroxidase 91 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 Gene3D - 91 288 - -
Lele52g1394 289 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 Gene3D Peroxidase, domain 2 118 267 - -
Lele52g1394 289 FunFam Peroxidase 118 266 - -
Lele52g1394 289 SUPERFAMILY Heme-dependent peroxidases 45 288 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 Gene3D - 45 90 - -
Lele52g1394 289 PANTHER PEROXIDASE 72-RELATED 38 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele52g1394 289 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1394 Lele-ChrLele52 17831325 17834183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1394 45 90 Peroxidase AT1G68850 76.087 4.18e-20 87.0