Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1388 ATGATCCCTTCTGAGATCAGAGGAACAAGCCACTATCTAACTCCAGACGACAACCCATTCTTAATACCACAAAACATCAACACCTTTCTTCCTTCCGACAACCTTTTCACAAACCTTGACATAACCAATCTCCTTGGAACGACCCATCATCATCATCTTCTTCTTCACAGTGAACTTAATAATGTTGTTCCAGCTTCTTCTTCAACCGCTGATGAAGCTGAAGATCAGAAGCAGACAATCATGATCGATGAGAGGAAACAGAGACGGATGATATCCAACAGAGAGTCAGCTAGAAGGTCGAGGATGAGAAAACAGAGACACAAGGATGAATTGTGGTCTCAGGTTGTTAGACTGAGAACAGAGAACCACAACCTTATTCATAGACTCAACCATCTTTCAGAGTCCCATGACAGGATGGTTCAGGAAAATGTTAAGCTCAAAGAAGAAGCTTCTGATCTTCGCCAAATGGTTGCAGATTTGCAGATTGGCTCTCCTTTTTCTGCCAACGCCCTCAAGGATTTTGATGACTTATGA 534 0.4251 MIPSEIRGTSHYLTPDDNPFLIPQNINTFLPSDNLFTNLDITNLLGTTHHHHLLLHSELNNVVPASSSTADEAEDQKQTIMIDERKQRRMISNRESARRSRMRKQRHKDELWSQVVRLRTENHNLIHRLNHLSESHDRMVQENVKLKEEASDLRQMVADLQIGSPFSANALKDFDDL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1388 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Lele52g1388 177 Gene3D - 83 139 - -
Lele52g1388 177 Pfam bZIP transcription factor 85 142 IPR004827 GO:0003700|GO:0006355
Lele52g1388 177 Coils Coil 129 156 - -
Lele52g1388 177 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 11 167 IPR044521 -
Lele52g1388 177 CDD bZIP_plant_GBF1 86 137 IPR045314 GO:0003700|GO:0006355
Lele52g1388 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 146 IPR004827 GO:0003700|GO:0006355
Lele52g1388 177 SUPERFAMILY Leucine zipper domain 85 135 IPR046347 GO:0003700|GO:0006355
Lele52g1388 177 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Lele52g1388 177 FunFam BZIP transcription factor 83 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1388 Lele-ChrLele52 17777841 17778374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1388 37 168 bZIP Transcription Factor Family AT3G30530 55.000 2.62e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele52g1388 bZIP_1 2.9e-12 CL0018