LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g1387	ATGATCCCACAAGACTTCAACATCTTCCTTAACCACAACGAAATCATCCAGAACCTTAACATAAGTGCTCTCTCTGCTGGTAAAACTCTTCTTCTTCATCATCATCAAGAGCTTAATAACGTTGTTGCTTCGTCGTCGTCAACCTCGGATGAAGCCGAAGAGAAGAAGCAGAGACGAATGATGTGCAACAGAGAGTCAGCTCGAAAGTCGAGGATGAAGAAGAAGAGGCACATGGACGAGCTAACGTCGCTGGTGGTGAGACTCAGAACACAGAACAACGATCTTGTTCAGAGACTGAAGCATGTGACAGAGTCCCATGATAGGGTTCTTCAGGAGAATGCTAAGCTCAGAGAAGAAGCTTCCCATCTTCGACAAATGCTTGAGAGCTCTTTCGCACTCGCCTTGAATATTGATTTTGATGAGCCTCCCTGA	432	0.456	MIPQDFNIFLNHNEIIQNLNISALSAGKTLLLHHHQELNNVVASSSSTSDEAEEKKQRRMMCNRESARKSRMKKKRHMDELTSLVVRLRTQNNDLVQRLKHVTESHDRVLQENAKLREEASHLRQMLESSFALALNIDFDEPP	143

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g1387	143	MobiDBLite	consensus disorder prediction	49	67	-	-
	Lele52g1387	143	Coils	Coil	78	126	-	-
	Lele52g1387	143	MobiDBLite	consensus disorder prediction	42	78	-	-
	Lele52g1387	143	Gene3D	-	53	108	-	-
	Lele52g1387	143	FunFam	BZIP transcription factor	53	104	-	-
	Lele52g1387	143	PRINTS	cAMP response element binding (CREB) protein signature	88	105	-	-
	Lele52g1387	143	PRINTS	cAMP response element binding (CREB) protein signature	50	66	-	-
	Lele52g1387	143	PRINTS	cAMP response element binding (CREB) protein signature	68	88	-	-
	Lele52g1387	143	PANTHER	BASIC LEUCINE ZIPPER 43-RELATED	32	129	IPR044521	-
	Lele52g1387	143	Pfam	bZIP transcription factor	51	113	IPR004827	GO:0003700\|GO:0006355
	Lele52g1387	143	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	53	116	IPR004827	GO:0003700\|GO:0006355
	Lele52g1387	143	SUPERFAMILY	Leucine zipper domain	55	105	IPR046347	GO:0003700\|GO:0006355
	Lele52g1387	143	CDD	bZIP_plant_GBF1	56	107	IPR045314	GO:0003700\|GO:0006355
	Lele52g1387	143	SMART	brlzneu	51	115	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g1387	Lele-ChrLele52	17764133	17764564	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g1387	42	127	bZIP Transcription Factor Family	AT3G30530	53.125	3.29e-28	100

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele52g1387		bZIP_1	3.3e-11	CL0018