Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele52g1378 | ATGAAGCGGAGCCACCGGTTCAGCCGTATAGCAGCTAATGTAGTTTACAATGAATTCATTAAAAATAAAGATCATGTTCATACGAATTCCACTCGATGGCTTACACTAACTGAATTTTTCAAGTATTTGGGTCGAACTAGCAAGTGTAAGGTTGAAAAAACACCCCAAGATTGGGTGTTCTCTTGGTTCATCAACAAAACCTACAACCAAGATAAAACCGGAGGGACAAAAGAAGGAGGAGGAGGAGGAGGAGGAAGGAAAACTGTAGTCTCTTTGAAGAGGAAATCAATATGGGATAAAGTAATTAGGGAAGAAGAGAAGGAGGAGAGGATTAATAGAAAGGATTACTGGTTGTATGAGGGAATTGTTGTTAAGGTCATGAATAAAAGGTATTACAAGCAAAAAGGTGTTGTATTAAAAGTGATTGCCAAGTATGTTGGGGAAATAGAGATGCTTGAAAGCAAGAATGTGATCAGAGTTGATCAAGCTGAGCTTGAAACTGTGATTCCCAAAATTGGTGGTCTTGTGAAGATAGTAAATGGAACTTATAGAGGATCTATAGCAAGATTGTTTGGGGTGCATATAGATCACTTTTGTGCCAAAGTGCAGATAGAGATGGGAGAGTCCCTGAAACTTATGATGGAACTTATGATGGGAGAGTGCTCCAGGCAATGGAGTACGAGGATATCTGCAAAATAG | 699 | 0.3934 | MKRSHRFSRIAANVVYNEFIKNKDHVHTNSTRWLTLTEFFKYLGRTSKCKVEKTPQDWVFSWFINKTYNQDKTGGTKEGGGGGGGRKTVVSLKRKSIWDKVIREEEKEERINRKDYWLYEGIVVKVMNKRYYKQKGVVLKVIAKYVGEIEMLESKNVIRVDQAELETVIPKIGGLVKIVNGTYRGSIARLFGVHIDHFCAKVQIEMGESLKLMMELMMGECSRQWSTRISAK | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele52g1378 | 232 | SMART | Kin17_mid_2 | 1 | 114 | IPR019447 | - | |
| Lele52g1378 | 232 | Pfam | KN17 SH3-like C-terminal domain | 113 | 161 | IPR041330 | - | |
| Lele52g1378 | 232 | Gene3D | - | 1 | 78 | IPR038254 | - | |
| Lele52g1378 | 232 | PANTHER | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG | 1 | 63 | IPR037321 | - | |
| Lele52g1378 | 232 | Pfam | Domain of Kin17 curved DNA-binding protein | 1 | 69 | IPR019447 | - | |
| Lele52g1378 | 232 | Gene3D | - | 170 | 218 | IPR014722 | - | |
| Lele52g1378 | 232 | Gene3D | - | 121 | 169 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele52g1378 | Lele-ChrLele52 | 17661227 | 17662095 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele52g1378 | 1 | 63 | C2H2 Transcription Factor Family | AT1G55460 | 65.079 | 1.59e-24 | 98.6 |