Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1335 ATGGGTGTTGAAATTGTGAAATTTAGGTGTCAAATTGAGGAATGCACAGGAGATGGTTCATATCAGCTGGAAAATCCAATGGAAGAACCACAAGGTCAGGTTTATCCATCCCATCAATCTGAATCTGCCTCATCTCATGATGGTGGTGCAAGATCTAACTTCATTGGGCACGTGAATCATGGGTCTAATTTAAGAGGACTGAAGAAAAGAGGCCATGGAAGTCGTTCTTGGATAAAAATTTATCAGGATGGAAATTCAAAGACTGTGACCCTTGATAAGGCCACTATTATGAGATGTTGCTCTTTGCCTTCCAGAGATCTCCGACTATTGGATCCTATGTTCATTTATCCATCTACCATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAACAAATCCGATGCATCATAACTGCTGATGAGGTTTTTCTAATGAATTCCTTGGATGGAAGTGTTGGCCAGTACAAGTTAGAATTATGCAATCGGCTTCAGAAAGAAATATCTGATGATCTGCCATTTGAACTCAGGGCACTGGAGCTGGCTCTGGAGTTGACATGCTCATCTTTGGATACCCAGGTGAATGAGCTAGAAATGGAAATATATCCTGTACTAGATGAGCTAACATCATCCATCAGTACTCTTAATCTAGAACGCGTTCGAAGATTTAAAGGCCACCTCCTTGCATTGACTCAACGAGTCCAAAAGGTTCGTGATGAAATAGAGCATCTGATGGATGACGATGGGGACATGGCTGAGATGTGCCTGACTGAGAAGAAGAGACGATTGGATACTTACCCTTTAAGTGACCTTTTCCTTCAGACGCATTTATCAGGATCTGGAACAGTGATTTCAAAATCAGCTCCTGCTTCACCAGAGCGGACCTTGAGTGGTGCTGAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCAAGTAAATATGGCAGCTTGGCTGGTTCATCTAATAATGAGGAAAAGATTGAACCACTTGAAATGCTGCTTGAAGCATACTTTATCGTCATTGACAACACTCTTAATAATTTATTGTCGCTTAAAGAATATATCGATGACACTGAAGATTTTATCAATATAAAATTGGGCAATATTCAGAACCATCTGATACAATTTGAGTTGCTTCTAACAGCAGCTACATTGTTAGCTACAATATTTGCCGCTGTGACAGCAGTTTTTGGAATGAATTTTGAAACTACAGTATTTGACCATCCATCTGGATTCCACTGGGTTTTGGTAGTTACTGGAATTGGTTGTGCACTTGTATACTTCTCCTTCCTATTCTATTTCAGGAACAAGAAAGTGCTTCCAGCATAA 1332 0.4047 MGVEIVKFRCQIEECTGDGSYQLENPMEEPQGQVYPSHQSESASSHDGGARSNFIGHVNHGSNLRGLKKRGHGSRSWIKIYQDGNSKTVTLDKATIMRCCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVFLMNSLDGSVGQYKLELCNRLQKEISDDLPFELRALELALELTCSSLDTQVNELEMEIYPVLDELTSSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRLDTYPLSDLFLQTHLSGSGTVISKSAPASPERTLSGAEMLQRAFSSIGNSSKYGSLAGSSNNEEKIEPLEMLLEAYFIVIDNTLNNLLSLKEYIDDTEDFINIKLGNIQNHLIQFELLLTAATLLATIFAAVTAVFGMNFETTVFDHPSGFHWVLVVTGIGCALVYFSFLFYFRNKKVLPA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1335 443 Gene3D Magnesium transport protein CorA, transmembrane region 152 374 - -
Lele52g1335 443 Gene3D - 63 148 - -
Lele52g1335 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 432 IPR045863 -
Lele52g1335 443 Coils Coil 227 247 - -
Lele52g1335 443 FunFam Magnesium transporter MRS2-1 65 148 - -
Lele52g1335 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 46 441 IPR039204 -
Lele52g1335 443 CDD Mrs2_Mfm1p-like 77 440 IPR039204 -
Lele52g1335 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Lele52g1335 443 MobiDBLite consensus disorder prediction 19 50 - -
Lele52g1335 443 MobiDBLite consensus disorder prediction 32 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1335 Lele-ChrLele52 17009635 17012871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1335 44 442 MRS2 Gene Family AT2G03620 64.532 5.65e-173 489