Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1330 ATGATGGTAACGCCTTTTTCTTTCTCTGCCCATTTTGATTTTCCTGAGGTGCCTTTTGATGCGTTTTCGCTTTTAGTGTGTCAATAAATGGTTGAGCATGTGAAGACAGTGGCAAAACTGAATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCTGTGGGATATAAAAACGTCATTGGTGCAAGGCGAGCATCTTGGCGTATTATGTCTTCAATTGAGCAGAAAGAAGAGTCAAAGGGAAATGAGAACAATGTTAAGCTGATCAAGAGTTACCGCCAAAAGGTTGAGGAGGAACTCTCTAAGATTTGTGGTGACATTCTGACAATTATTGATGAGCATCTTATACCCTCTTCCACATCTGGAGAAGCCACTGTGTTTTACTATAAGATGAAAGGTGACTATTTTAGGTATCTTGCAGAGTTCAAGACTGACCAAGCAAGGAAAGAGGCAGCTGAGCAGTCCCTCAAGGGATATGAAGCTGCTTCAGCCACTGCTAACACAGAACTTCCATCAACACACCCAATCCGTCTTGGTCTCGCGCTTAATTTCTCTGTGTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCATGCCATTTGGCTAAACAAGCCTTCGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTGTGGACCTCCGATTTGCCAGAGGATGGAGGTGAAGATGGTAACAAAAATGAAGAAGTCAAACCAGCTGAACCTGAGGTTGGGGTAGGATTTGCAGAAAGAGAACTAGATTCACAAAAAATGGAGCCTGGTGAAGAGCTCGCTGGAGATGGAGACTGTGGGGGAAGAATAAATATCTTGAGCCAGGTTGCCGCCGCAAGTTGTTGCTCACCCGCAGGTGGGTTGGTTCTCAAAAAGGCTGGAGGAGGAGATGAGAAGGCAGGATTGAATTTGGGTTCCAAAGATTGTAAATTCGATCCAGCAATTGCAGGACTTCCTCAGAAGAGAAGTATCGGTCAAAACTGTCAAGGGATCATACTGAGATCTTCAATTATGTAA 1086 0.4401 MMVTPFSFSAHFDFPEVPFDAFSLLVCQXMVEHVKTVAKLNLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYRQKVEEELSKICGDILTIIDEHLIPSSTSGEATVFYYKMKGDYFRYLAEFKTDQARKEAAEQSLKGYEAASATANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDGNKNEEVKPAEPEVGVGFAERELDSQKMEPGEELAGDGDCGGRINILSQVAAASCCSPAGGLVLKKAGGGDEKAGLNLGSKDCKFDPAIAGLPQKRSIGQNCQGIILRSSIM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1330 361 Coils Coil 199 219 - -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Lele52g1330 361 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Lele52g1330 361 Gene3D - 23 250 IPR036815 -
Lele52g1330 361 Pfam 14-3-3 protein 28 239 IPR023410 -
Lele52g1330 361 MobiDBLite consensus disorder prediction 241 263 - -
Lele52g1330 361 PANTHER 14-3-3 PROTEIN 28 242 IPR000308 -
Lele52g1330 361 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Lele52g1330 361 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Lele52g1330 361 Coils Coil 149 169 - -
Lele52g1330 361 SMART 1433_4 16 252 IPR023410 -
Lele52g1330 361 SUPERFAMILY 14-3-3 protein 31 246 IPR036815 -
Lele52g1330 361 MobiDBLite consensus disorder prediction 245 263 - -
Lele52g1330 361 FunFam 14-3-3 gamma 1 26 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1330 Lele-ChrLele52 16947578 16952771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1330 30 257 14-3-3 family AT1G26480 88.158 1.54e-148 418