Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1320 ATGTACGAAGCAATGGACAAAACTCAGAATCCAGACCGGGCTCATAAGAAACAGATCACGAAGTTTCTTGCATTTGAACTACTGATGATCATCGGGAAGAAGAAGAGAATCACCATAGTGTTCGGAAGTGACAGTTCTATAAGTACAAGATCCGACCCACAAAAAGAGGACAGACCCCTAAAATTTCGTCCTTTTTTTAAAGAAAAAAATTTCAACTCCACAAAAGTACAGAGAGCTCAAAATTGTAGTGGGGAAGGGATGAAAAGATCAAATTTTGAAGAAAAGTATAGACAGAGACATGTGGGAGCCACCGGCGCCGGAAAATCCAGACTCTCCATTGACCTCGCAAAACGCTTCCCCTCCTCCGAAACCATCGACTCAGATAAACTGCAAGTCTACAGAGGCCTCGACAAAACCACGAACAGGATCCCAACTGACGAGCTCAACAGCGTCCCTCATCATCTCGCCGGCGACGTCGATCCAGAAATCGGAGAGTTCACCCCTTCAGATTTTCTATTGCGCGCCGTTTCTGCAATCTCCGACATTTCTTCCAGGAGGAAGCTTCCCATCGTCGATGGTGGATCTAACTCGTTCGTTCACGATCTGCTCGTCGACCGATTCGAGCCCGAGATCAATGAATTCCATGGGTCATCGTCGAAATTGAGATCCGATAGCTGCTTCTTGCAGATGCACGTGTCACTTCCTGCGTTGTCTGATTACGTAGGGAAGCGAGTCGAAGACATGCTCGACTCGGGAATGGCGGAAGAGGAGAGAAGAAAACTGGAAGAAAGAGAGGGAAAGGGAAAGAAAATTCTTGGATCTAAAGAGACTTATGTAGATGAAGGAAAAATAAAAGAAATGGTGTATATTATTATTTCATTGTATAGGACTACAACTAATCTTATTACATTAAAGCAGGTCAACAAATAA 930 0.443 MYEAMDKTQNPDRAHKKQITKFLAFELLMIIGKKKRITIVFGSDSSISTRSDPQKEDRPLKFRPFFKEKNFNSTKVQRAQNCSGEGMKRSNFEEKYRQRHVGATGAGKSRLSIDLAKRFPSSETIDSDKLQVYRGLDKTTNRIPTDELNSVPHHLAGDVDPEIGEFTPSDFLLRAVSAISDISSRRKLPIVDGGSNSFVHDLLVDRFEPEINEFHGSSSKLRSDSCFLQMHVSLPALSDYVGKRVEDMLDSGMAEEERRKLEEREGKGKKILGSKETYVDEGKIKEMVYIIISLYRTTTNLITLKQVNK 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1320 309 Pfam IPP transferase 131 207 - -
Lele52g1320 309 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 101 263 IPR039657 -
Lele52g1320 309 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 234 264 - -
Lele52g1320 309 Gene3D - 101 233 IPR027417 -
Lele52g1320 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 206 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele52g1320 Lele-ChrLele52 16852416 16859048 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1320 101 203 C2H2 Transcription Factor Family AT2G27760 42.718 3.42e-21 91.7