Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1318 ATGGAAGACAAAGACAAAGACAAAGCAGCAGCAGCATCCCACCCTGCAATACCTCCGACGGAGTTCACCACCGACTCTTCGAGCTGGGGGCTCGGGCCCGATGATTCTGACGGCGTCTATTTCTTCTCTGGTGACCGAGATACCAGCAGTATACTCAGCGAGTTCGGGTGGAATCTCAAACCGGAGCAACCGCACCGGATCGGTGTCGATGATACGTCTGATGTTGCGGGAGGAGAAGGCGGCGGGAGCGGAGGAGGAGGATTGTGGTTTCCGGATCACTCTGCTCCGCGTGGCTCGACGGAACAAGCTGATAAGGCAAACTCTGCGGCGGCGGCGGCGGCGGCCGATACTTCCACATCGAATAATCAATCGGTATCTTCGAGCTCCAGTGAGGATCCGCCCGAGAAGTCCACCGTCTCAGACGAAAAACCGCCGGAGATACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACAAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGCCAAAAGGCCGTAAAAAACAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGTACAGTGAAGAAAAGGGTGGAGCGCTCTTCGGAGGATCCAACCGTTGTGATAACCACGTACGAAGGCCAACACTGTCATCACACTGTTGGGTTCCCTAGAGCAGGAGCATCAATCATGAGCCATCATGAAGCCGCCGCCTTTGTGGCCGCCACAGCCGCGGCCGGCCAGTTAGCTCCAACCATGTCACAGTTCTATTATCCCATCCAATTACCAAGAGACAACACTACTAACCTTTCTTCTCAGGCTCCTCATCCTCATCATCATCACCAACAGGCACAGGATCATGAACCAGCCGGAGGATCATCCAGCACTGTAACGTGTCCAGATGATGCCGCCTCGCAGCAGCCTCCGGCCGATCAAGGACTTCTCGGAGACATAGTGCCCCCAGGAATGCGCAATGGATGA 1023 0.5396 MEDKDKDKAAAASHPAIPPTEFTTDSSSWGLGPDDSDGVYFFSGDRDTSSILSEFGWNLKPEQPHRIGVDDTSDVAGGEGGGSGGGGLWFPDHSAPRGSTEQADKANSAAAAAAADTSTSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHHTVGFPRAGASIMSHHEAAAFVAATAAAGQLAPTMSQFYYPIQLPRDNTTNLSSQAPHPHHHHQQAQDHEPAGGSSSTVTCPDDAASQQPPADQGLLGDIVPPGMRNG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1318 340 MobiDBLite consensus disorder prediction 1 45 - -
Lele52g1318 340 ProSiteProfiles WRKY domain profile. 170 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g1318 340 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 296 IPR044810 GO:0003700
Lele52g1318 340 MobiDBLite consensus disorder prediction 301 319 - -
Lele52g1318 340 SUPERFAMILY WRKY DNA-binding domain 167 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g1318 340 Gene3D WRKY domain 162 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g1318 340 MobiDBLite consensus disorder prediction 281 340 - -
Lele52g1318 340 Pfam WRKY DNA -binding domain 176 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g1318 340 MobiDBLite consensus disorder prediction 58 163 - -
Lele52g1318 340 MobiDBLite consensus disorder prediction 100 134 - -
Lele52g1318 340 FunFam WRKY transcription factor 57 161 235 - -
Lele52g1318 340 MobiDBLite consensus disorder prediction 135 152 - -
Lele52g1318 340 SMART WRKY_cls 175 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1318 Lele-ChrLele52 16836037 16840073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1318 21 339 WRKY Transcription Factor Family AT1G69310 50.307 4.25e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele52g1318 WRKY 3.4e-25 CL0274