Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1282 ATGAGAATATTCCACCGGGGACCGTGGTTGTCATTGGGGCATTGGAGCATGAAAGGAACAAGTAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTCCAGAAGCTGGTTTACAACTTATGCTTTACTTTTGTTAGAGGCCCCAAGCCAATTTCTTTGGTTCCTCCTGCTTAGCCAGTGTTGTCAAATGCAAATCATACAGCTCCAATGCAAGTCACACAACCCTAA 249 0.4378 MRIFHRGPWLSLGHWSMKGTSRPTHYHVLWDENQFTSDELQKLVYNLCFTFVRGPKPISLVPPAXPVLSNANHTAPMQVTQP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1282 82 Pfam Piwi domain 14 64 IPR003165 GO:0003676
Lele52g1282 82 SUPERFAMILY Ribonuclease H-like 4 64 IPR012337 -
Lele52g1282 82 ProSiteProfiles Piwi domain profile. 19 63 IPR003165 GO:0003676
Lele52g1282 82 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 14 65 - -
Lele52g1282 82 Gene3D - 9 73 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1282 Lele-ChrLele52 14532584 14533244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1282 14 64 Eukaryotic Initiation Factors Gene Family AT1G48410 60.784 9.81e-19 77.0