Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1266 ATGGAGATGGAAAGCCAATGTGAAGATCATCATTCAGCAGAGCAGTTCAGCAGAAGAGGAACCACCATTTTCGAAACTTGTTTCAATGGACTCAATATCTTAACAGGTATTGGAATACTTTCAATGCCCTATGCAGTTTCTCAAGGAGGGTGGCTAAGTTTAATTATGCTACTTCTGGTCGCAATGCTTTGTTGGTACACAGGACTGCTTCTACACAGGTGTATGAATGGACGGCCCCTCATCAAATCCTACCCCGACATAGCCGCGGAAGCTTTTGGATACAAAGGAAGAGCCATAGTATCCACAGTGATCTACCTAGAACTGTTTCTGGCAGCCATAGCACTTCTAATACTAGAAGGTGACAACTTGGAGAAGATGTTCCCAAACATGAGCTTCAAAGCATGTGGCCTCAAAATTGCAGGGAAACAAGGCTTTGTGGTTCTCACAGCCCTAGTGATATTACCAACCACATGGCTAAGAAACTTAGGTATTTTGGCCTATGTTTCTGTTGGTGGTGCCCTAACATCAATTATTCTGGTTGGTTGTGTTAGTTGGGTTGGAGCTTTTGATGGTGTAGTGTTTCATGAAAGAGGAAAAATAGTGAATTTGGGAGGATTGACTACATCTGTTAGCCTCTATATATTTTGCTATTGTGGCCACTCTGTGTTTCCGACCCTACGCAGTTCCATGAAAGATACAAAACAATTTCCCAAGGTTCTACTTATCTGCTTTACCATAAGCACCGTAACCTATGGAGTCATGGCCATAATAGGCTACATGATATTTGGAGAATTTTCAAAGTCTCAAGTGACCTTAAATCTTCCAACAAGAGAATTAAGCACCAAAATAGCAATATATGCTACAATAATTAACCCCATCACTAAGTATGCAATTACGGTCACTCCAATTGCCAATGCCATCGAGAGCAAAATTCTATTTCATAATAAAAAGAGCAGGCCTATTAGCGTAATCATTAGAACAAGCATTTTGATAAGCACTGTTCTTGTTGCACTATTTATTCCATTTTTTGGATACCTCATGGCTTTCACTGGTGCTCTCTTGGGCGTCACTGGCTCATTGATTCTACCTTCCCTGTGTTACCTAAAGATCGATAAAGCTTCTCGAAGATTCGGGTTCGAGTTGATCATCATTACTGGGATTCTACTAATAGGACCATTCATTCTTGTGCTCGGTAGCTACTACTCTCTGAAACAAATAGTGAATCATCTACAGAAGCCATGA 1242 0.409 MEMESQCEDHHSAEQFSRRGTTIFETCFNGLNILTGIGILSMPYAVSQGGWLSLIMLLLVAMLCWYTGLLLHRCMNGRPLIKSYPDIAAEAFGYKGRAIVSTVIYLELFLAAIALLILEGDNLEKMFPNMSFKACGLKIAGKQGFVVLTALVILPTTWLRNLGILAYVSVGGALTSIILVGCVSWVGAFDGVVFHERGKIVNLGGLTTSVSLYIFCYCGHSVFPTLRSSMKDTKQFPKVLLICFTISTVTYGVMAIIGYMIFGEFSKSQVTLNLPTRELSTKIAIYATIINPITKYAITVTPIANAIESKILFHNKKSRPISVIIRTSILISTVLVALFIPFFGYLMAFTGALLGVTGSLILPSLCYLKIDKASRRFGFELIIITGILLIGPFILVLGSYYSLKQIVNHLQKP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1266 413 Pfam Transmembrane amino acid transporter protein 20 373 IPR013057 -
Lele52g1266 413 PANTHER OS05G0424000 PROTEIN-RELATED 30 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1266 Lele-ChrLele52 11919948 11923706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1266 8 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.000 5.12e-133 386