Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1263 ATGGAGATTGGAAACCAACTTGAAGATCAACAATCGGAGCTCCCGAGAAGAGGAACAACCTTTTTCAAGACTTGTTTCAATGGGCTCAATGCCTTGTCAGGTATTGGGATACTTTCAATGCCTTATGCAGTATCTGAAGGAGGGTGGCTGAGTTTAGTTCTACTGCTTCTGATTGCAATCCTCTGTTGGTACACAGGGATGCTTCTGCACAGGTGTATGGATGGACGTCCCCTCATCAAATCCTACCCTGATATAGGAGAGGAGGCTTTTGGGTATAAAGGCAGAGCCATAGTATCCATTTTCATGTACCTTGAGCTCTATCTTGTGGCTACAGGGTTTCTGATATTAGAAGGTGACAACTTGGATAAGTTATTCCCAAACATGAGCTTTAAAGTCTGTGGCCTTAGAATTGCAGGGAAACAAGGCTTTGTGCTTCTCACAGCCTTAGTGATATTACCAACCACATGGCTTAGAAGCTTAGGAGTTTTGGCCTATGTTTCTGTTGGTGGTGTTCTTGCTTCAATTATTTTGGTTGGTTGTGTTGTGTGGGTTGGAGCTTTTGATGGTGTAGGGTTTCATGAAAGAGAAAAAATGGTGAATTGGGGAGGATTGACTACTTCTGCTAGTCTCTTTACATTTTGCTATTGTGGCCACGCCGTGTTTCCAACCCTACGCAGTTCCATGAGAGAACCAAGACAGTTTCCCAAGGTTCTGCTTGTCTGCTTTATCTTAAGCACCATAACCTATGGACTAATGGCCATCACAGGCTACATGATATTTGGAGAATATTTGAAGTCTCAAGTGACCTTAAATCTTCCATCAAGAGAAATAAGCACCAAAATAGCGATATATACTACATTAATTAGCCCCTTCACTAAGTATGCAATTATAATCACTCCAATTGCCAATGCTATTGAGAGCAAAATTTCATTTCATAATAAAAAGAGCAGGCCTATTAGCATACTCATTAGAACAAGCATTTTGATCAGCACTGTTCTTGTTGCACTATTCATTCCCTTTTTTGGATACCTCATGGCTTTTACCGGTGCTTTCTTGGGTGTCGCTGGCTCATTATTGCTACCTTCCCTGTGTTACCTAAAGATCAATAAAGCTTCTCAAAGAGTTGGGTTTGAGTTGATGATCATTATAGGGATTCTACTGACAGGACCATTGATTGCTGTGGCGGGTACCTACAACTCTGTGAGACAAATAGTGAATCACCTACAGAAGCCCTGA 1236 0.4167 MEIGNQLEDQQSELPRRGTTFFKTCFNGLNALSGIGILSMPYAVSEGGWLSLVLLLLIAILCWYTGMLLHRCMDGRPLIKSYPDIGEEAFGYKGRAIVSIFMYLELYLVATGFLILEGDNLDKLFPNMSFKVCGLRIAGKQGFVLLTALVILPTTWLRSLGVLAYVSVGGVLASIILVGCVVWVGAFDGVGFHEREKMVNWGGLTTSASLFTFCYCGHAVFPTLRSSMREPRQFPKVLLVCFILSTITYGLMAITGYMIFGEYLKSQVTLNLPSREISTKIAIYTTLISPFTKYAIIITPIANAIESKISFHNKKSRPISILIRTSILISTVLVALFIPFFGYLMAFTGAFLGVAGSLLLPSLCYLKINKASQRVGFELMIIIGILLTGPLIAVAGTYNSVRQIVNHLQKP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1263 411 Pfam Transmembrane amino acid transporter protein 18 399 IPR013057 -
Lele52g1263 411 Gene3D Amino acid/polyamine transporter I 15 405 - -
Lele52g1263 411 PANTHER AMINO ACID TRANSPORTER 12 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1263 Lele-ChrLele52 11164824 11167671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1263 7 405 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.244 1.81e-144 415