Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1246 ATGAGTCGCAGAGAGCGAGTCCGCCGTGGAAGTCGGAGGTCCCGAGATTCCATAGACGGCGCCAGTAGCCTTAGGGTTTGCGAACCGCAGCAACAACAACAACATAGACCTCCTTGTACGGACTTCGACGTGGCCTATTTCCATTCTTATTCTCATGTTGGTATCCATGAGGAGATGATCAAGGATCGGGTGCGGACTGAAACTTACAGATCAGCAATCACACAATTCCAGAGTTATATTGCAGGAAAAGTTGTAGTGGACGTTGGATGTGGCACTGGCATCCTTTCTATATTTTGTGCTCAAGCTGGTGCAAAGCGGGTGTATGCAATTGATGCTAGTGACATTGCTTTGCAGGCAAATGAAGTGGTGAAAGCAAATAATCTATCTGATATTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATAGATGAAGAGGTTGATGTCATAATCTCCGAATGGATGGGATATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATCACAGCTAGGGATCGCTGGCTCAAACCTGGAGGTCTTATTCTTCCTTCTGATGCGAAGCTGTACATGGCTCCTGTAACTCATGCTGACCGATACAGTGAAAGCATTGACTTCTGGCGTAATGTCTATGGAATTGATATGTCTGCCATGTTACCTTTAGCTAAACAATGTGCATTTGAAGAACCTTCTGTGGAAACAATAACGGGGGAAAATGTTCTGACATGGCCTCATCTGGTAATACATGTTGACTGTTATTCGGTTACCATCCAAGAGCTAGAATCTGTCTCAACTAGATATAAATTCAAGTCAATGATGCGAGCTCCACTGCATGGGTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCCACAACAGCACCAGCAAATTCTTATTTTACAAATTTGTCTGTTGACAACCATCCAGTGGATGGAAGTCACCGAAAGAAACGGACAAATCCCAGCGATGCATTGGTCCTGTCCACTGCACCCGAGGACCCTCCAACGCATTGGCAACAGACGTTGATATACTTCTATGATCCCATAGAACTAGAGCAAGATCAAGTTATTGAAGGCTCAGTGGTGCTGTCTCAAAGCAAAGAAAATCGTCGATTTATGAATATTCACCTAGAATATTCCTCAGGTGGTCGTTCCTATGTGAAAGAATCTGTTATGAGATGA 1185 0.4371 MSRRERVRRGSRRSRDSIDGASSLRVCEPQQQQQHRPPCTDFDVAYFHSYSHVGIHEEMIKDRVRTETYRSAITQFQSYIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDIVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSDAKLYMAPVTHADRYSESIDFWRNVYGIDMSAMLPLAKQCAFEEPSVETITGENVLTWPHLVIHVDCYSVTIQELESVSTRYKFKSMMRAPLHGFAFWFDVEFNGPTTAPANSYFTNLSVDNHPVDGSHRKKRTNPSDALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGSVVLSQSKENRRFMNIHLEYSSGGRSYVKESVMR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1246 394 Pfam Ribosomal protein L11 methyltransferase (PrmA) 81 155 - -
Lele52g1246 394 FunFam Protein arginine N-methyltransferase 6 39 185 - -
Lele52g1246 394 CDD AdoMet_MTases 85 184 - -
Lele52g1246 394 Gene3D Vaccinia Virus protein VP39 40 185 IPR029063 -
Lele52g1246 394 MobiDBLite consensus disorder prediction 1 37 - -
Lele52g1246 394 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 43 394 IPR025799 GO:0016274|GO:0018216
Lele52g1246 394 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 382 IPR025799 GO:0016274|GO:0018216
Lele52g1246 394 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 49 384 IPR029063 -
Lele52g1246 394 FunFam Protein arginine N-methyltransferase 6 187 392 - -
Lele52g1246 394 Gene3D - 187 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1246 Lele-ChrLele52 10300736 10369626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1246 46 361 C2H2 Transcription Factor Family AT3G12270 38.369 4.34e-64 213