Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1227 ATGAATTATTGCAAGTGGAAGCCTGTTGCTTTGATGATTCTTGTGAATTTAGCTCTGGCTTTCGTGAATTTGCTTCTGAAGAAAGTTCTTAGTGAAGAAATGAGCTTCTTGACCATCATAACTTATCGACAGTTGGTTTCGACATTTTTCTTGTCACCTATTGCATTTTTCTATGAAAGGAAAAGCAAGCTTTCAGTTCACATATTATGTCTTCTTTTCCTCAGCGCTCTTGTTGGGGTAACATTCACTCAGTACCTATTCCTTCTTGGACTTGGATACACGTCAGCAACATTTTCATGTGCATTCCTCAACATGGTTCCTGTATTTACCTTCATCATGGCTCTGCCTTTTGGAATAGAAAAGGTGAACTTGAAAAGCATGAGTGGGAAAGCCAAAGTGCTGGGCTCACTTATATGCATTGGTGGAGCTTTATTACTTGGCCTTTACAAAGGATTGCCCTTAACAGCAATAACCACACCAAACAACAACGCTTCAAACACTTTATCCTCACCCCCACCTTCTTCGTCTTCGTCTTCGTCTTCGTCTTCATCATCGTCACAATGGGCTATAGGTTCAGTACTTCTCATAGGAGGCTGCCTATTGTGGGCGTCATGGTTCCTTATTCAAGCGAAGATTAACAAGAGATACCCATTTCAGTACTCAAGCACTGCCATTTTGTCGCTGTTTGGAGCCATTCAATCCGCTGTCTTGAACTTGATCATCAACAGGAATCATAATTATGCCAACGTCTGGATTCTCCATGGCAAGTTGCAGATCATGACTGTCCTTTACGCTGGGTTGGTGGGATCGGGCTTGTGCTACGTGGCAATGTCATGGTGTGTGAAAGAACGAGGCCCAGTTTTCACAGCGGCATTCACGCCCCTCATACAGATGTTTGTGGCTATTCTTAGTCCCTCTATCTTACATGAGCAAATTTATCTTGGAAGTGCTGTAGGATCATGCATGGTTATTGTGGGCGTGTATATTCTTCTATGGGGTAAAAGCAAAGGAGCCGAAGAGCAATATGTGGCCAGCAAGGGGCAAGCCAATCAACAAGTCGAAGAGTGTCAATAG 1074 0.432 MNYCKWKPVALMILVNLALAFVNLLLKKVLSEEMSFLTIITYRQLVSTFFLSPIAFFYERKSKLSVHILCLLFLSALVGVTFTQYLFLLGLGYTSATFSCAFLNMVPVFTFIMALPFGIEKVNLKSMSGKAKVLGSLICIGGALLLGLYKGLPLTAITTPNNNASNTLSSPPPSSSSSSSSSSSSSQWAIGSVLLIGGCLLWASWFLIQAKINKRYPFQYSSTAILSLFGAIQSAVLNLIINRNHNYANVWILHGKLQIMTVLYAGLVGSGLCYVAMSWCVKERGPVFTAAFTPLIQMFVAILSPSILHEQIYLGSAVGSCMVIVGVYILLWGKSKGAEEQYVASKGQANQQVEECQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1227 357 MobiDBLite consensus disorder prediction 165 184 - -
Lele52g1227 357 PANTHER WAT1-RELATED PROTEIN 7 340 IPR030184 GO:0016020|GO:0022857
Lele52g1227 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 148 - -
Lele52g1227 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 260 336 - -
Lele52g1227 357 Pfam EamA-like transporter family 190 331 IPR000620 GO:0016020
Lele52g1227 357 Pfam EamA-like transporter family 8 138 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1227 Lele-ChrLele52 9158629 9165220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1227 6 265 Nodulin-like Gene Family AT3G30340 45.038 6.96e-73 226