Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1218 ATGACTCGATTTGGACCTGTTTTGATATTGCTTAAAGTGAATGCAAAACTAGAAAGGGATGCATATTGGGGGAAATCATGCTGTAGATATTGTCTCTCCTACGAAGTTTCTAATTGTGATTTCAATACTTTTGTGAAGAAACCTTCGGGTAACCAGGATGTGTTGGCCTCTATTGAGGCATCTTTGTCTTATATCCCTGATTCTTCGCTGATATCACCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTGCTCTTGGAAACGGAAGTTATTAGTAGATCATCAAATGACAGGAATATTCTTTCAGTTGGGGTTGAAGAGAACAATGCAGAAGCGGTTAATTCTGGTTCACTGGATGATGTTGAGAAAATCAGGCTTGCTGAAGCTGCTGTAAAAGTTCAGGCTGGTTTTAGGGGCTATCAGGCTCGTCAGGCATTTCAAACACTAAAAGGTGTCATACAACTGCAAGCTCTTGTTCGAGGCCACTTGGTTAGGAGGCAAGCTGTTTCTACTTTCTACTGTGTGAAGGGAATCGTAAAAATTCAAGCGCTTGTTCGCGGTCACAAGGTTCGACATTCTGATATTGGGGTTGCTGTTCTCAAAACTTTCCAGGATACTAAATATTCAAATTCTACTGGATTAGTTACATCTACACAGGCAGAGAAGTCGCCAACCGGTGTTTTTGTTAACCAGCTTCTGGCCTCGTCATCCTCAACTGTTCCCATACATCTTAATTTTGATCCTGAAGAACGTAACTTCGCTTGGAAGTGGCTTGAGCGTTGGACGAGGTCAAACTTTTGGGCACCTCTTCCCAAATCAAAAAAGAAACATGACTTAAACTCCAATGAGAAGATTGCCAATTGTCATAACAAGGGGATACCTAAAAGAAATGTCAAGAAAGCTTCTGGTTTGAAAGTCGATGATAGCTCAACCTCAGAGTTAAACACACTTAAACAGCCTGCCAAAAAGGAAAATCCACAAAAGGAAACAAAAACCCGTACTAAGAAAACTTCAATGCAGAGTGTTTCTAGTACATCTGAGGTTGCCTCTGAGAAAAGGAAACACGTCACTGGAAAACTTTCGGGTCATGCGGTTACTGATGTTTCAGCAGATGAAATGAAAAGTTTGGGAGTGTCAAAATCAAATCAGTCTGATCTTGAAAAGAGCCTTGGGTTGCAAGCAAAAGAAGAGAATGGCCACTCACACGAAAATCCTATCGCTGATTCGCAGGCGAGTGTAAAGAATGGTAAACAAGTTATTCAAGGAGATGGTGAGGAATTAAAAATTGATGTGATCCCTCAGAACGCCCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCTCACAACACTCCAAGAGTTCCTAGCTATATGGCCCCCACTGAATCCGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTAGGTTTGCTGGTGACTTGGTGGATAAAATTGGTATAACCAGGCGTCATTCACTTTCAACTTCATTAAATGCAAGGTTTAACTCATTTTCCCCACGACCAGGACTGTTAACCACAAGCAGCAGAGGAGTAATCAGGACTGATAGATCTGTGTCATCATTAAGAGATGGAACTGGCAAGTTCATCCAACCACAGTGGAGAAGGTGA 1644 0.4197 MTRFGPVLILLKVNAKLERDAYWGKSCCRYCLSYEVSNCDFNTFVKKPSGNQDVLASIEASLSYIPDSSLISPPTSGADASKEVLLETEVISRSSNDRNILSVGVEENNAEAVNSGSLDDVEKIRLAEAAVKVQAGFRGYQARQAFQTLKGVIQLQALVRGHLVRRQAVSTFYCVKGIVKIQALVRGHKVRHSDIGVAVLKTFQDTKYSNSTGLVTSTQAEKSPTGVFVNQLLASSSSTVPIHLNFDPEERNFAWKWLERWTRSNFWAPLPKSKKKHDLNSNEKIANCHNKGIPKRNVKKASGLKVDDSSTSELNTLKQPAKKENPQKETKTRTKKTSMQSVSSTSEVASEKRKHVTGKLSGHAVTDVSADEMKSLGVSKSNQSDLEKSLGLQAKEENGHSHENPIADSQASVKNGKQVIQGDGEELKIDVIPQNALRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPRFAGDLVDKIGITRRHSLSTSLNARFNSFSPRPGLLTTSSRGVIRTDRSVSSLRDGTGKFIQPQWRR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1218 547 MobiDBLite consensus disorder prediction 270 368 - -
Lele52g1218 547 Gene3D - 124 173 - -
Lele52g1218 547 ProSiteProfiles IQ motif profile. 176 202 IPR000048 GO:0005515
Lele52g1218 547 MobiDBLite consensus disorder prediction 304 321 - -
Lele52g1218 547 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Lele52g1218 547 Pfam IQ calmodulin-binding motif 176 191 IPR000048 GO:0005515
Lele52g1218 547 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Lele52g1218 547 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Lele52g1218 547 Pfam Protein of unknown function (DUF4005) 449 516 IPR025064 -
Lele52g1218 547 PANTHER IQ-DOMAIN 5-RELATED 97 501 - -
Lele52g1218 547 SMART iq_5 125 147 IPR000048 GO:0005515
Lele52g1218 547 SMART iq_5 148 169 IPR000048 GO:0005515
Lele52g1218 547 SMART iq_5 173 195 IPR000048 GO:0005515
Lele52g1218 547 MobiDBLite consensus disorder prediction 444 463 - -
Lele52g1218 547 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Lele52g1218 547 MobiDBLite consensus disorder prediction 397 416 - -
Lele52g1218 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 191 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1218 Lele-ChrLele52 8971775 8975592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1218 101 547 IQD Protein Family AT2G02790 33.710 2.21e-67 227