Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1217 ATGTGCAACTGTAGGAAAACCCGGTGTTTGAGAAATTTACTGTGCGTGTCTGTCACAGTTTTCTGCTTCGTTCTCCATGCCAAATGCCAGTCTTTATCTCCTGAGAATATGAAAGTTTTCTGGGTTTCTTTTATTTTCTTGTTCCCTGCGATCGTTGTTTCTCTGCTTGGTCAGATTTCAACGGCGCAATTGATCACAAGTGAGAGAATTCTTCTTCTCCAGGCCAAGAGGTTGCTTGAATATCCTCAGGTTCTTCAAGGATGGAGAAGATGGACCAGCTTCTGCTATCTCCCCCCTTCACCTTTTGTCAAGATTGTCTGCTCCAACGGCCATGTGACAGAACTAACCATTGTGGGGAACAAGGTCTCGCCATCTTCTTCTCAAACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTCACTGTCTTGACGAAGCTATCAAGTTTGAAGGTACTGTCACTTGTGTCTCTAGGTTTGTGGGGTCCTTTACCTGCCAAGATAGGTAGGTTCTGGTCACTTGAAGTTTTGAACATTAGCTCAAATTCCATCTATGGTGAAATCCCAGCATCAATCCGTTCTTTAAAAAAACTTGGGAGTCTGACTTTGGCTGATAATTTGTTCAATGGCAGTGTTCCAGATCTGAAAACACTAGCTTTTCTTGAAGAACTTAATCTGGGTGGAAACAAACTGGGTTCTGAATTCCCTTCATTCGGGAACAATCTTGTGCGAATTATCCTGAAAAACAACTCCTTTAAGTTTCAGATTCCTTCCAGAATCATGTCTTTTCACAGGCTTCAAGATTTTGACATCTCTTTCAATGAATTTTCTGGACCAATCCCACCTTCTCTGTTCTCTCTGCCTTCCATTGTGCACATAAACTTAGCTCAAAACCAACTCACTGGCGGATCCTCTGTGAACATAAATTGTAGTTCTAAGTTAACATTTGTGAATCTCTCAGACAACCTTTTAGTTGGAAAATTCCCTCCTTGCTTTGGATCATCAAAGTCCTCAAATCGCACTGTATTGTATTCTGGTAATTGCTTTTCAGCTAGAAGCTTAACGGGCAAGCATCAACATCCATCTTCATATTGTATGAAAGAGAAGGCCTTTGCAGTGAAGCCTGTGGAGAGAAGCCAGAAGAAGGAGACAGGTATGAGATTTCTTTTGACGATTGGAGTTATTGGTGGTTCTGCTGGATTCGTTGTTCTTCTGTCACTGTTCATTGTGTTCACATGGAGGAAATGCAAAGGAGACAGAGCACATCATAAAGATTTAGATAGATATAATGTGCATAAGCTCACAAGACCAAATATTCATGCAAGACGTGTTCCTCAGACCATGAGGCTATGTGCACTTGGACTCCCACCATACAGAATTTTCACATCAGAAGAAATTGAAGATGCAACAAACAACTTTGATCCATCAAATCTAATATCACAAGGATCTAAAGGAAAGACATATAAAGGTTGGCTCAGAGATGGTTCAGAGGTCCTTTTCAACTGTGTGGAAGTAACAGACAAGAACTTAACGCAAAGTCTGATGAAACAACACATGGAGGTTTTACCCAATTTGAGGCACAGACATTTGGTAAGTGTGCTAGGACATTGTATCATTACTCCTCATCAAGACCATTCCCATCTAAGAAGCACAGTCTTCATTGTCCTTGAGCACTTCTCAAATGGCTCACTCAGGCATCATCTTTCAGATTTGAAAAAGAAGCAAGTGCTGAAATGGCCTCAGAGAATGGCAATAAGCATAGGAATTGCAAGAGGGACACAGTTCTTGCACACAGGGGTTGTTCCTGGCATATTTGGCAACGATTTACAGATTGACAAAATTTTGCTTGATGATAATCTCAACCCAAAAGTCAGTGGATATAACATTCCATTGCTATACAAGCAAGGTTTTGAGAGCACACTTCTTGAACAAAGTGGCCCCAATCATGTTGCAAGAATCGACACAGCAGAAAAGGAAGATATATATCAATTGGGTGTTATTCTTCTTGAAGTCATTACTGGCAAAAGACTTTCCTCTGCCAGGGAAATAGAGGATCTAAAGGATGAGCTGGAGAGAGGTTTATCAGAAGCAGCATCAACACTAAGAAGTGCAATAGATCCATCCATTCAAGGAAGTTACGCATATGAATCACTGAGGACTGCAATTCAAATCACAATCAACTGTTTGTGCAAAGTTCCCAGTAAGCGACCTTCAATAGAGGACGTTCTTTGGAACTTGCAGTATTCACTGCAAGTCCAAGAGTCATGGACCACCAGCAGTGGAAACCTTGGTACAAAGTTTTAG 2301 0.4107 MCNCRKTRCLRNLLCVSVTVFCFVLHAKCQSLSPENMKVFWVSFIFLFPAIVVSLLGQISTAQLITSERILLLQAKRLLEYPQVLQGWRRWTSFCYLPPSPFVKIVCSNGHVTELTIVGNKVSPSSSQTLSERFSIDSFFTVLTKLSSLKVLSLVSLGLWGPLPAKIGRFWSLEVLNISSNSIYGEIPASIRSLKKLGSLTLADNLFNGSVPDLKTLAFLEELNLGGNKLGSEFPSFGNNLVRIILKNNSFKFQIPSRIMSFHRLQDFDISFNEFSGPIPPSLFSLPSIVHINLAQNQLTGGSSVNINCSSKLTFVNLSDNLLVGKFPPCFGSSKSSNRTVLYSGNCFSARSLTGKHQHPSSYCMKEKAFAVKPVERSQKKETGMRFLLTIGVIGGSAGFVVLLSLFIVFTWRKCKGDRAHHKDLDRYNVHKLTRPNIHARRVPQTMRLCALGLPPYRIFTSEEIEDATNNFDPSNLISQGSKGKTYKGWLRDGSEVLFNCVEVTDKNLTQSLMKQHMEVLPNLRHRHLVSVLGHCIITPHQDHSHLRSTVFIVLEHFSNGSLRHHLSDLKKKQVLKWPQRMAISIGIARGTQFLHTGVVPGIFGNDLQIDKILLDDNLNPKVSGYNIPLLYKQGFESTLLEQSGPNHVARIDTAEKEDIYQLGVILLEVITGKRLSSAREIEDLKDELERGLSEAASTLRSAIDPSIQGSYAYESLRTAIQITINCLCKVPSKRPSIEDVLWNLQYSLQVQESWTTSSGNLGTKF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1217 766 Pfam Leucine Rich Repeat 172 194 IPR001611 GO:0005515
Lele52g1217 766 Gene3D Phosphorylase Kinase; domain 1 439 546 - -
Lele52g1217 766 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 558 761 - -
Lele52g1217 766 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 112 746 - -
Lele52g1217 766 Gene3D Transferase(Phosphotransferase) domain 1 558 759 - -
Lele52g1217 766 Coils Coil 679 699 - -
Lele52g1217 766 Gene3D Ribonuclease Inhibitor 65 241 IPR032675 -
Lele52g1217 766 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
Lele52g1217 766 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 65 239 - -
Lele52g1217 766 SUPERFAMILY Protein kinase-like (PK-like) 452 751 IPR011009 -
Lele52g1217 766 ProSiteProfiles Protein kinase domain profile. 472 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1217 766 SUPERFAMILY L domain-like 66 347 - -
Lele52g1217 766 Pfam Protein kinase domain 476 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1217 Lele-ChrLele52 8951610 8957164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1217 81 764 Miscellaneous Gene Families AT3G03770 39.757 1.12e-172 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele52g1217 Pkinase 3.7e-15 CL0016