Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1211 ATGGCTGTATCATTAAACTTCAAACATTGGAACTCCAACGAATCTGCTAAGCAATTTAATGATAAAACTAAATTAGTCATTTTGTTCTTAAAAGGCAAAATGGAGCTTGCAACTGTAAAATCTGAATTCTGCCCAAGAAACCATAGGATGTTCATGACGGAAGGCGGAAATATCGACATGAAGTGCACGAAAAGGCGGCGAAGAGACTCGTCGGTGGCGGTTTTAGAGGGCAATGAGAAACAAGAGCAACCCCCACTGGGTGGCCAACTAACTACTGTCAAGAGAAGTTCAAGGTTTCGTGGAGTTAGCAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAAAAGAAGAAAGGGAAGCAAGGAGCTTATGCTGATGAAGAAGCTGCCGCCAGAGCATATGATTTAGCTGCACTCAAGTACTGGGGAACTTCTACCTTCACAAACTTCCCTGTATCTAATTATGAGAACGAGATTGAGATTATGAGAACTATGACAAAAGAAGAATATCTTGCTTCTTTAAGAAGGAGAAGCAGTGGATTTTCCAGAGGAGTATCAAAGTACAGAGGAGTTGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGAATAGGGAGAGTTTTTGGTAACAAATACCTTTACCTTGGCACTTACAGTACACAAGAAGAGGCTGCGCGTGCATATGATATTGCAGCTATAGAATACAGAGGCTTGAATGCAGTAACAAACTTTAACTTGAGCACGTATATGAGATGGCTAAGACCAGAAGCCCTTAATACTACTTGTCATGAACAAAAGCAAAACCCAGAATTTCACCATCTCACGACCAACCCTAACCTCACCCAAACCAGAGAGTTCACTGAGGTACCTAATTTCAATCACAATCCAAAGGAGCAAGACATACCTCAGTATTCAACCCCTTTATCTCATAGCAGTAGTTCAAAGTCATCATCTTCTCCAACAGCATTAGGGCTCCTGCTGAAATCCTCAGTGTTCAGAGAGCTAATGCAGAAAAACATGAATCGTGGAAAAGGTGAAGAAGAAGAAGAAGAAAACCCACAAGAAGGAAGTGATGGGTTTCCTTACTTATTCTCTTCCAATGGAAATAGAATACCAAATTTACTGTTACCAGAAGAGAGAGCATTTCCAACACAGTATCATAGAACTGAGGAATCTGTATGGAATGGATGCTTTCAAAGAATCTGA 1236 0.4118 MAVSLNFKHWNSNESAKQFNDKTKLVILFLKGKMELATVKSEFCPRNHRMFMTEGGNIDMKCTKRRRRDSSVAVLEGNEKQEQPPLGGQLTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYADEEAAARAYDLAALKYWGTSTFTNFPVSNYENEIEIMRTMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFNLSTYMRWLRPEALNTTCHEQKQNPEFHHLTTNPNLTQTREFTEVPNFNHNPKEQDIPQYSTPLSHSSSSKSSSSPTALGLLLKSSVFRELMQKNMNRGKGEEEEEENPQEGSDGFPYLFSSNGNRIPNLLLPEERAFPTQYHRTEESVWNGCFQRI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1211 411 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 68 323 - -
Lele52g1211 411 SUPERFAMILY DNA-binding domain 196 257 IPR016177 GO:0003677
Lele52g1211 411 FunFam AP2-like ethylene-responsive transcription factor 196 257 - -
Lele52g1211 411 Gene3D AP2/ERF domain 97 163 IPR036955 GO:0003700|GO:0006355
Lele52g1211 411 Gene3D AP2/ERF domain 196 257 IPR036955 GO:0003700|GO:0006355
Lele52g1211 411 MobiDBLite consensus disorder prediction 300 331 - -
Lele52g1211 411 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 PRINTS Ethylene responsive element binding protein signature 237 257 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 ProSiteProfiles AP2/ERF domain profile. 98 161 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 SMART rav1_2 98 167 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 SMART rav1_2 197 261 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 MobiDBLite consensus disorder prediction 351 374 - -
Lele52g1211 411 CDD AP2 196 257 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 ProSiteProfiles AP2/ERF domain profile. 197 255 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 Pfam AP2 domain 196 247 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 Pfam AP2 domain 97 153 IPR001471 GO:0003700|GO:0006355
Lele52g1211 411 SUPERFAMILY DNA-binding domain 97 163 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1211 Lele-ChrLele52 8884900 8889933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1211 94 259 AP2-EREBP Transcription Factor Family AT5G57390 69.231 4.37e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele52g1211 AP2 1.3e-07 CL0081