Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1191 ATGATGGGACCTTGTAGACAACAATGCGATCTGAGTAAACTGGATGTAACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGCACCATAGGCCATGTGTCTTATGGCAAGTCAACTGTTGTTAAAGCAATATCAGGTGTTCAGACTGTTCGATTTAAAAATGAGTTTAACATTACAATCAAGCTTGGATATGCGAATGCAAAGATATACAAGTGCGACGATGAATGGTGTCCCGGGCCCATGTGCTACAAGGCATATGGAAGTGGAAAAGAAGACAGTCCTATGATTGACGGCCATGATACTTATATGACTACCATGATCAATAGAGAAGCAATCATGGATGGAGCCTTATTACTTATTGCTGCAAATGAGAGTTGTCCACAACCACAAACCTCTGAGCATCTGGCTGCTGTGGAAATTATGCTGTTACAACACATAATAATTATTCAGAATAAGGTTGATCTGATTCAAGAAAATGTGGCTATCAATCAGCATGAAGTTATTCAGAAGTTTATACAAGGAACTGTTGCTGACGGTGCACCTGTAGTCCCAATTTCAGCCCAGCTAAAGGATAAAATAGATGTTGTTTTTCGACCTGGAATAGTTTTCAAGGACGAGAACGGGAATATAAGATGCACACCCATATACTCTAGAATAGTTTCATTATACACTGAACAAAATGAGCTTCAATTTGCTGTGCCAGGAGGTCTAATTGGTGTTGGCACAACCATAGATCCCACATTTACACGTGCTGACAGATTGGTGGGTAATGTTCTTGGAGATGTTGGATCATTGCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTGCTTCGAAGGCTTCTCGGTGTTCGGACAAAAGGATCTGGTAGACAAGGAAAGGTATCCAAGCTTGTCAGAGCAGAGATCCTAATGTTGAATATAGGATCAATGGCAATAGGGGCCAGAGTTCTTGCAGTGAAAAATGACTCGGCAAAGTTGCAACTAGCTACCCCAGTGTGCACCAGTAAGGGGGAGAAGATTGCTCTGAGTAGGCTTGTTGAGAAGCATTTTCGTCTGATCGGGTAG 1092 0.4176 MMGPCRQQCDLSKLDVTKLHPLSPEVISRQATINIGTIGHVSYGKSTVVKAISGVQTVRFKNEFNITIKLGYANAKIYKCDDEWCPGPMCYKAYGSGKEDSPMIDGHDTYMTTMINREAIMDGALLLIAANESCPQPQTSEHLAAVEIMLLQHIIIIQNKVDLIQENVAINQHEVIQKFIQGTVADGAPVVPISAQLKDKIDVVFRPGIVFKDENGNIRCTPIYSRIVSLYTEQNELQFAVPGGLIGVGTTIDPTFTRADRLVGNVLGDVGSLPEVYVELEVNFLLRRLLGVRTKGSGRQGKVSKLVRAEILMLNIGSMAIGARVLAVKNDSAKLQLATPVCTSKGEKIALSRLVEKHFRLIG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1191 363 Gene3D - 30 207 IPR027417 -
Lele52g1191 363 Gene3D Translation factors 260 363 - -
Lele52g1191 363 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 272 363 IPR009001 -
Lele52g1191 363 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 8 204 - -
Lele52g1191 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
Lele52g1191 363 CDD eIF2_gamma_III 274 363 IPR015256 -
Lele52g1191 363 SUPERFAMILY Translation proteins 196 271 IPR009000 -
Lele52g1191 363 PRINTS GTP-binding elongation factor signature 34 47 IPR000795 GO:0003924|GO:0005525
Lele52g1191 363 PRINTS GTP-binding elongation factor signature 116 127 IPR000795 GO:0003924|GO:0005525
Lele52g1191 363 PRINTS GTP-binding elongation factor signature 154 163 IPR000795 GO:0003924|GO:0005525
Lele52g1191 363 Pfam Initiation factor eIF2 gamma, C terminal 284 363 IPR015256 -
Lele52g1191 363 FunFam Eukaryotic translation initiation factor 2 subunit gamma 30 211 - -
Lele52g1191 363 Pfam Elongation factor Tu GTP binding domain 32 202 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1191 Lele-ChrLele52 8470271 8475164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1191 10 363 Eukaryotic Initiation Factors Gene Family AT1G04170 59.864 8.52e-165 467