Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1176 ATGAGCGGATGGGACAGGGTTCGAACATCATCGTCTTCTTCGAGATCGTCCCTTGGAATGGGTTCCAATCCCACTCGTAACCTCCCCAATCGCATACCTTCGAGTCGGGCTGTTCAACTCGGTCGAGTCCAGCCCCAAGCCCCCGGTCATCGTACCGTTTTCTGCAATGATCGGGATGCCAATCTTCCCGTCCGATTCAAGGGAAATTCGATATCAACGACAAAATACAATCTTTTCACTTTCTTGCCGAAAGCACTGTTTGAACAGTTCAGGCGGGTGGCTAATCTATACTTTCTTACAATCTCAATTATGTCAACCACACCTATCAGTCCTGTGTCTCCAATAACTAATGTGGCTCCTCTATCACTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAACGACTTGGCTGTAAACAATACTTTGATAGATGTTCTGCAAGACCAAAAGTGGGTTTCCATACCTTGGAAAAGGTTGCAAGTTGGAGATGTTGTCAGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATCTGCTTTTCCTGGCCAGTACCAATCCTGATGGTGTCTGCTACATTGAGACTTCCAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCGGAGAAGGCGTCCGAGTTTAAAGGTGAGGTTCAATGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATAATTCAAAAGCAAACATTGCCTCTCAGTCCTAACCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAATATATTGTTGGGGTTGTTATTTTTACTGGACATGAAACAAAGGTAATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAGCTCGACAAGCTCATACTTGCTCTATTTGTGACTCTCTTTGTCATGTGTTTACTTGGAGCCATTGGCAGTGGCATCTTCGTAAACAACAAGTATTTCTACTTACGTCTTAATGCAGGTGATGAGGGTTCTGGGCAGTTCAACCCGGGGAATAGAATTTTGGTTATTACTTTGACCATGTTTACCCTCATCACTTTATACTCGACAATCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTGCACTCAGTTTATCAACAAAGATTTGCGCATGTACCACAGTGAGACCAATACCCCTGCATTAGCCAGAACTTCCAATTTAAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGCGAGATCTATGGAAATGGCATCACTGAAATTGAGAGAGGATTAGCTGAACGCAATGGCATTAAAATTCAGGATAATAGATCAGCCAATGCAGTGCAAGAAAAGGGTTTTAATTTTGATGATGCAAGGCTTATGCGTGGAGCCTGGAGGAATGAGCCTAATCCTGATAGTTGCAAGGAATTTTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGGCGCACACCTACCTCAATATATGTTCGTGAATCTCATGCTGAGAAGATGGGTATAATTCAGGATATGTCTTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTACTGTAAGGGTGCTGATAGTGTAATCTATGAGAGATTGGCTGATGGTTATAATGATATAAAGAAAGTGACTAGGGGTCATTTGGAACAATTTGGATCTGCTGGACTACGTACTTTATGCCTAGCCTACAAAGAATTGCCTCCTGACGTGTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTTCGTGATCGTGAAAAGAAGTTAGATGAGATGGCAGAACTTATAGAAAATGGTCTCATTTTGATTGGTTGCACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCGACTACTATAGAGATCCTTCAAAGGGCTGGCATTAAAATTTGGGTTCTTACAGGAGATAAGATTGAAACAGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTGTCATCAGTTCTGAAACTGATGTAATTAGAGAAGCTGAGGAAAGGGGTGACCAAGTGGAAATTGCACGTGTCACTAAGGAAGAAGTGAAAAAAGAGCTGAAGAAGTGCCTGGAGGAAGCCCAGAGCTACCTTTCATCACTATCTGGACCTAAATTAGCCCTCGTAATTGATGGGAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGACGCTGCTGAATTTGAGTTTAAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTTACAAGTTTGGTAAAAAAAGGTGCACGGAAAATAACACTTAGTATTGGCGATGGGGCCAATGATGTCAGCATGATTCAGGCTGCTCATGTTGGTGTTGGCATAAGCGGGCTTGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTATTACTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAACGTTATCTTCACGGCCCTACCAGTGATCATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCGTGAAGTACCCTGAGCTGTACATGGAGGGGATAAGAAACGTCTTCTTCAAATGGAGAGTTGTGGCAATATGGGCCTTTTTTTCTGTTTACCAGTCTCTAATTTTGTACTATTTTGTTAGTACAGCAAGTTTAAGTGCTAAAAATTCAGCTGGCCTAACATTTGCAGTTTGGGATGTCAGTACAATGGCGTTCACATGTGTTGTAATAACTGTGAACTTGCGGCTTCTTATGATTTGTAACTCAATTACAAAGTGGCACATTATAAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCTTTCGTATATTGCGCCATCATTGGAAAGGGGAATACTTATTTTGTCATATTTGTCTTGATGAGCACGATCTATTTCTACCTCACAATTATTTTAGTACCAGTTGTTGCACTTTTTGGTGACTTTATTTATCAAGGGGTTCAAAGATGGTTCTTCCCCTATGACTATCAGATCCTTCAGGAAATGCATCGACACGAAGTGGAGGGTACTAGCAGGGCACAACTGCTGGAGATAGAGAACCAGCTTACACCAGCTGAGGCAATAAGCTATGCAATATCTCAACTCCCTCGCGAGATCTCGAAGCACACCGGGTTTGCTTTCGATTCGCCCGGGTATGAGTCCTTTTTTGCCGCACAGTTAGGCGTATATGCCCCACAAAAGGCATGGGATGTTGCCAGACGAGCTAGTGCCAAGTTAAAGCCCAAAGTGCAGAAAAAATGA 3690 0.4171 MSGWDRVRTSSSSSRSSLGMGSNPTRNLPNRIPSSRAVQLGRVQPQAPGHRTVFCNDRDANLPVRFKGNSISTTKYNLFTFLPKALFEQFRRVANLYFLTISIMSTTPISPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNTLIDVLQDQKWVSIPWKRLQVGDVVRVKQDGFFPADLLFLASTNPDGVCYIETSNLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILALFVTLFVMCLLGAIGSGIFVNNKYFYLRLNAGDEGSGQFNPGNRILVITLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGLAERNGIKIQDNRSANAVQEKGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTSIYVRESHAEKMGIIQDMSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADGYNDIKKVTRGHLEQFGSAGLRTLCLAYKELPPDVYESWNEKFIQAKSSLRDREKKLDEMAELIENGLILIGCTAIEDKLQEGVPTTIEILQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDQVEIARVTKEEVKKELKKCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVTLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSVKYPELYMEGIRNVFFKWRVVAIWAFFSVYQSLILYYFVSTASLSAKNSAGLTFAVWDVSTMAFTCVVITVNLRLLMICNSITKWHIISVGGSILAWFIFAFVYCAIIGKGNTYFVIFVLMSTIYFYLTIILVPVVALFGDFIYQGVQRWFFPYDYQILQEMHRHEVEGTSRAQLLEIENQLTPAEAISYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASAKLKPKVQKK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1176 1229 Gene3D - 558 687 IPR023299 GO:0000166
Lele52g1176 1229 FunFam Phospholipid-transporting ATPase 695 902 - -
Lele52g1176 1229 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 44 1183 - -
Lele52g1176 1229 FunFam Phospholipid-transporting ATPase IC 428 440 - -
Lele52g1176 1229 FunFam Phospholipid-transporting ATPase 127 296 - -
Lele52g1176 1229 CDD P-type_ATPase_APLT_Dnf-like 68 1022 - -
Lele52g1176 1229 Coils Coil 770 797 - -
Lele52g1176 1229 Pfam Phospholipid-translocating ATPase N-terminal 53 117 IPR032631 -
Lele52g1176 1229 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Lele52g1176 1229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 437 709 IPR023299 GO:0000166
Lele52g1176 1229 Pfam Cation transport ATPase (P-type) 528 622 - -
Lele52g1176 1229 Gene3D - 692 902 IPR023214 -
Lele52g1176 1229 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1136 IPR023298 -
Lele52g1176 1229 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 941 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g1176 1229 SUPERFAMILY HAD-like 419 904 IPR036412 -
Lele52g1176 1229 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 66 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele52g1176 1229 MobiDBLite consensus disorder prediction 1 33 - -
Lele52g1176 1229 Pfam E1-E2 ATPase 152 387 - -
Lele52g1176 1229 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Lele52g1176 1229 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Lele52g1176 1229 SFLD C1.7: P-type atpase like 413 913 - -
Lele52g1176 1229 SFLD p-type atpase 413 913 IPR044492 -
Lele52g1176 1229 SUPERFAMILY Calcium ATPase, transduction domain A 149 292 IPR008250 -
Lele52g1176 1229 Gene3D - 131 296 - -
Lele52g1176 1229 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1136 IPR032630 -
Lele52g1176 1229 FunFam Phospholipid-transporting ATPase 539 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1176 Lele-ChrLele52 8238978 8258208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1176 30 1229 Primary Pumps ATPases AT1G59820 78.506 0.0 2021