Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1166 ATGTCACCGGACGGCGATGTCATTACGTCTACTCCGGGAGCCTTCAGGCTCCGCTGGGACGTCTTTCTGAGCTTCAGAGGTGCGGATACTCGTCGTTGCTTCACCATACCCCTCTACAACGCCCTCCAATCCCGCGGCGTTCGGGTTTTCCTTGACGACGTAGGACTGGATCGCGGTGACCAGATAGACCTGAAACTGCTCGAAGCCATAGATGACTCGGCCGCTTCGATTATTATATTCTCTCCTAGATATGCTTCTTCTCATTGGTGTCTGGAGGAGCTCGCCAAGATTTGGGACTGCAGGAGATTGATTCTGCCGGTGTTCTTCAACGTCGATCCGCGTGATGTTCGGAAGCAAGAGGGTCCATTCAGAAAATATTTCAAGAAACACGAAGCCAAGAGGAGGGAAGAAGAGGTAAGCAGATGGAGAAAAGCTATGAAGAAAGCAGGTGGAATTGCTGGTTTCCCTTTCTGGCATCCCAGTGAAAAGGAAAAGAGAGATGACCTGATTCGACTTTTGGTGAAAAGGATTCTGAGAGAACTGAGCAATGCTCCGGTGGGCGTGCCTGAATTTACTGTTGGACTCGATGCTCGTATTGAAAACTTGTTGGAATTGTTAGACATGAGATCCAATGGCATAAGAGTGTTGGGATTGTATGGGATGGGTGGGATTGGTAAGACTACCCTTGCGAAGGCTCTTTTTAACAGACTTGTTGTGGATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCAAAAGAGGGAGGCTTAATTTCTCTTAGAAGCAGAATTATCGGTGACATTTCCTCTCCAAAAGTGGTTGGTAACGATATTTCTGTATTCAGAAAAACAGTTAGTGAAAACCGTGCCCTGATAATTCTGGATGATGTCGATAATGTGAATCAGCTCGATACTCTAATTGGCAGAAGAGAATGGTTCCATGAAGGAAGCCGTATTGTAGTCACCTCAAGGGATACGCAAGCTTTGGCTGAGACTTACGTTAATGTCTTGTACGAGGTTCAGATATTGGATGACTCTGAATCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGACAAAACTCTCTTGAATTTGTCGAAGGAAATAGTGTCTCGGACAGGAAGATTGCCTTTAGCTCTGGAAGTGTTTGGTTCAATGCTGTTTGGTAACAGAAGGGAAAATGAATGGGTTGATGCTGTGAAGAAGCTGAAACTGATTCGACCTGGGAATCTCCAGGATGTGTTGAAGATTAGTTATGAGGGTTTAGATAAACAAGAGCAAGGCATCTTCCTTGACATTGCTTGTTTGTTCGTTCAAATGAGCATGAAGCGAGAAGATGTGATTGATGTATTGAGATGTTGTAGATATGGGGGAGAGATGGCAATCACTGTTCTCACACAGAGATGTTTGATCAGAATCAGAGAGGACGAAACCATTTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAACTTTGTTGATCCTGGTATGCGTACTAGATTGTGGGATCGATCTGAAATTCTACTTGTTTTGAGGAATTTGAAGGGGACTCGGAATATTCAAGGGATGGTCCTAGACTTCGAGAAAAGATCTGCTAAAGATTATAAAGCTGATGAAGCAATTTCTTGGAACAACCTTCAATGGGGTTCAAGTTTCTCAAATGCCCTGGCATTCCTTAAACAGAGGCACAAGAAATATTTTCAACGAGTTGAGAAAGACAAAGAGGCTCTGGTGATTCACACCAAGTCCTTTGAATCAATGGTGAACTTGGTGCTGCTTCAGATCAATTATTTGAGATTGGAAGGGAAGTTCGAATCTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGATGTACTTTAAAATCCATTCCTTCTGATTTTTGGCCCCCAGAATTGGCTGTCCTTGACCTCACATACAGCAATGTTGAGAACTTGTGGGATCGGAAAGGCTACAAGGTGCCAGAGAAAATAATGGTCATGAATTTGTCCCATTGCTACAAACTAGAAACTCTTCCTGATCTCTCCAGGTGTCAACGTTTAGAGAAGATTGTTCTTGAGAACTGCTTTAATCTAAGTAGGATTCATGAATCAGTTAGCAAATTGACCACACTTCGTGATTTGAATCTGACTCGTTGTAGAGAACTTACTGAGTTACCCAATGATATATCTAGGCTGGAAAATCTAGAAAACCTCTGTCTCTCTGACTGCGGGAAGTTGAAATTGTTACCAGAAAATATGGTCAACTTGAAATCGCTGAGAAAACTTCTTGCTGACCGCACGGCTTTAGTAAAGCTTCCTGAGACTATTTTTCACCTTGAGAAACTTGAAACTCTTAGTTTAAATGGTTGCCATCATTTAAAAAGGCTACCTGACAACGTAGGACTCTTGTGTTCTCTTCAAGAGCTGTCTCTCGACCATTCTGGATTAGAAGAACTACCCAATTCTGTCGGGCATTTGAAAAACCTTGAAATGCTTGGCTTGATGCATTGTGGATCTCTCACTAGGATTCCTGATTCTATTGGAGATCTCGTATCACTTTCAGAGCTTCGGCTTTTTGGTAGTGCTATTGGAGAGCTTCCATCTTCGATTGGATCATTGACTTATCTAAAAGAACTCTCAGTAGGAAATTGTAAGTTTCTGAATAAATTACCTGAGTCCATTAAGTCTTTGGTTTCCATTGTTGAGCTTCAGCTAGATGGGGCAGCCATCACATATTTGCCAGATGAGATTGGAAATATGGCATTACTTAAAAAGCTTGACATGAGGAATTGCCAGATGAGATATCTACCTAAATCGATTGGCAACCTCACAGCTCTTACAACCTGGAATATTTTCAAAGGTAAAATTGTAGAACTGCCAGAATCCGTTGGAAGGCTCGAGAATCTAGTCCATTTAAAGTTGGACCAATGCACAATGCTCAGAAGCCTTCCAAATTCTATAGGGCATTTGAAGTCCTTGTATCATCTTTTGATGGAGGAAACGGGTCTGACAGAATTACCTCCAAACTTTGGCATGCTTACCAGCTTAAGGACGTTGAAAATGGCCAAGAAATCCGAAAATAACATGCTTCAAGATTCTTTTGTAATCTCATCTTTTTTCTGCAATTTGATATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATATCTGGGAAAATCCCTGATGATTTTGAGAAATTGTCCTCTTTAAAAACTTTGAATCTAAGCCAAAACAAATTTTACAGCCTTCCTTCCAGTATGGCGGGCCTTGCAGTTCTCAAGGAACTTTATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGACGAAGCTGAATGCTGCAAACTGTTATGCCTTACAAAGCATTCATGACCTTTCAAATTTAAAAAGTTTAAAGGATCTGAACCTCACAAACTGTGCAAACTTGGTGGACATTCCTGGCCTTGAACAGTTGGAGTCTCTAATGTGGCTGTACTTGGGTGGATGCCTTAAATGCTCGTCCACAGTCCGCAAGAGGCTTTCTAAGGTTACACTGAGGAATTTATTGAACTTGAGCATGCCAGGAACAAGATTACCCAAATGGTTTTCAGGACAAACTGTAAGCTTTCCAAAGCCCCAGAACGGTGAACTAACTGGTGTAATTATAGGTATCATTCTTTCAATCAACCACGATATACCTTGTGAGCACCGGAATTTCCTTCCTGGAGTAGTTGATATCAAAATAGATGTCCTCAAACTCGGCAAAAAAATATGTACTTCAGGATTGGACTTGCGGGGATTGCCAAGTGCCAATGAAGAACGCATATACCTTTGCAGGTACCCAGATTACCATCATCTCTTCTCTTTTTTGAGAGATGGTGACACATTATGTGTGACTCGGTTAAACCCACCTGTGGATAAGGGGTTAGAGTTGAAAAAATGTGGGGTTCATTTGATCTTTAAAGGGGATGACGACTTTGGTGGAGATGAAGAATCTGTGGACCCAAGTTTACAATCTGTGTCAGAAAAATTGGCTAAGTTTTTCAACACTTGCGAAGAAGGTAGCTCCGAAGATGGAATTGAGGGTGAAGATGATGGTGAGTGCCAAAAGCAATTAGGGACCCAGGAAAAGGAAGACAGAATCTCATCATCATCTATTCCCAGCAACTCCAATTTTCTATTATATTTTATTAGTCCGCTCGTTTTCTTTTTGAGCTGGCTGCTAATAAAATTTGTCTTTACCCATGATGTATAG 4275 0.4189 MSPDGDVITSTPGAFRLRWDVFLSFRGADTRRCFTIPLYNALQSRGVRVFLDDVGLDRGDQIDLKLLEAIDDSAASIIIFSPRYASSHWCLEELAKIWDCRRLILPVFFNVDPRDVRKQEGPFRKYFKKHEAKRREEEVSRWRKAMKKAGGIAGFPFWHPSEKEKRDDLIRLLVKRILRELSNAPVGVPEFTVGLDARIENLLELLDMRSNGIRVLGLYGMGGIGKTTLAKALFNRLVVDFEHRSFISSVREVSSKEGGLISLRSRIIGDISSPKVVGNDISVFRKTVSENRALIILDDVDNVNQLDTLIGRREWFHEGSRIVVTSRDTQALAETYVNVLYEVQILDDSESLELFCYHAMRRKEPADKTLLNLSKEIVSRTGRLPLALEVFGSMLFGNRRENEWVDAVKKLKLIRPGNLQDVLKISYEGLDKQEQGIFLDIACLFVQMSMKREDVIDVLRCCRYGGEMAITVLTQRCLIRIREDETIWMHDQIRDMGRQIVVDENFVDPGMRTRLWDRSEILLVLRNLKGTRNIQGMVLDFEKRSAKDYKADEAISWNNLQWGSSFSNALAFLKQRHKKYFQRVEKDKEALVIHTKSFESMVNLVLLQINYLRLEGKFESFPAELKWLQWQGCTLKSIPSDFWPPELAVLDLTYSNVENLWDRKGYKVPEKIMVMNLSHCYKLETLPDLSRCQRLEKIVLENCFNLSRIHESVSKLTTLRDLNLTRCRELTELPNDISRLENLENLCLSDCGKLKLLPENMVNLKSLRKLLADRTALVKLPETIFHLEKLETLSLNGCHHLKRLPDNVGLLCSLQELSLDHSGLEELPNSVGHLKNLEMLGLMHCGSLTRIPDSIGDLVSLSELRLFGSAIGELPSSIGSLTYLKELSVGNCKFLNKLPESIKSLVSIVELQLDGAAITYLPDEIGNMALLKKLDMRNCQMRYLPKSIGNLTALTTWNIFKGKIVELPESVGRLENLVHLKLDQCTMLRSLPNSIGHLKSLYHLLMEETGLTELPPNFGMLTSLRTLKMAKKSENNMLQDSFVISSFFCNLIFLNDLDARGWRISGKIPDDFEKLSSLKTLNLSQNKFYSLPSSMAGLAVLKELYLQNCIELVSLPALPSSLTKLNAANCYALQSIHDLSNLKSLKDLNLTNCANLVDIPGLEQLESLMWLYLGGCLKCSSTVRKRLSKVTLRNLLNLSMPGTRLPKWFSGQTVSFPKPQNGELTGVIIGIILSINHDIPCEHRNFLPGVVDIKIDVLKLGKKICTSGLDLRGLPSANEERIYLCRYPDYHHLFSFLRDGDTLCVTRLNPPVDKGLELKKCGVHLIFKGDDDFGGDEESVDPSLQSVSEKLAKFFNTCEEGSSEDGIEGEDDGECQKQLGTQEKEDRISSSSIPSNSNFLLYFISPLVFFLSWLLIKFVFTHDV 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1166 1424 Gene3D - 17 179 IPR035897 -
Lele52g1166 1424 Gene3D Ribonuclease Inhibitor 527 907 IPR032675 -
Lele52g1166 1424 Pfam NB-ARC domain 198 413 IPR002182 GO:0043531
Lele52g1166 1424 Gene3D Ribonuclease Inhibitor 1123 1195 IPR032675 -
Lele52g1166 1424 Gene3D Ribonuclease Inhibitor 908 1122 IPR032675 -
Lele52g1166 1424 PRINTS Disease resistance protein signature 381 395 - -
Lele52g1166 1424 PRINTS Disease resistance protein signature 287 301 - -
Lele52g1166 1424 PRINTS Disease resistance protein signature 215 230 - -
Lele52g1166 1424 PRINTS Disease resistance protein signature 785 801 - -
Lele52g1166 1424 ProSiteProfiles Leucine-rich repeat profile. 1077 1098 IPR001611 GO:0005515
Lele52g1166 1424 SUPERFAMILY L domain-like 489 922 - -
Lele52g1166 1424 Pfam TIR domain 19 183 IPR000157 GO:0007165
Lele52g1166 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 807 IPR044974 GO:0006952
Lele52g1166 1424 SMART LRR_typ_2 1075 1098 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 811 834 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 905 927 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 716 740 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 764 787 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 998 1020 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 928 951 IPR003591 -
Lele52g1166 1424 SMART LRR_typ_2 858 881 IPR003591 -
Lele52g1166 1424 Gene3D - 345 431 IPR042197 -
Lele52g1166 1424 SUPERFAMILY L domain-like 895 1203 - -
Lele52g1166 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 155 IPR035897 -
Lele52g1166 1424 SMART till_3 18 152 IPR000157 GO:0007165
Lele52g1166 1424 CDD AAA 193 328 - -
Lele52g1166 1424 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Lele52g1166 1424 Gene3D - 180 339 IPR027417 -
Lele52g1166 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1166 Lele-ChrLele52 8154623 8160680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1166 19 840 WRKY Transcription Factor Family AT4G12020 28.341 2.52e-71 262