Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1164 ATGTCACCGGACGGCCACGTCGTGTTGTCGACTCCAGGAGCCTTCAGGCTACGCTGGGACGTCTTCCTAAGTTTCAGAGGTACGGATACTCGTGATTGCCTCACCAAACCCCTCTACAACTCGCTCGAATCTCGCGGTATTCGAGTTTTCCTCGACGATGTTGGATTGGATCGCGGTGACCAGATTGCCCCGAGTCTACTCGAAGCCATCGATGACTCGGCCGCTTCGATTGTCATCATTTCTCCGGACTACGCTTCTTCTCATTGGTGTCTGGAGGAGCTTGCCAAGATTTGCGACTGCGGGAGGCTGATTCTGCCGGTGTTCTACCGCGTAAGCCCGACTGATGTCCTCGAGCAAGCAGGTCCATTCGAAGATTCTTTCAAGGTTCATAAAGCCAAGAGGAGCGACGATGAGGTAATCAGGTGGAGGAAAGCTATGAAGAAAGTAGGTGGAATTGCTGGTTGGGTTTTCCAGAATCCCAGCGAAGAAGATAATCTAATTCGACTTTTAGTGCAAAGGATTCTGAAAGAACTAAGTAATACTCCGGTTGGTTTGGCTGAATTTACTGTTGGACTCAATGCTCGTATTGAAAAACTATTGGAATTGTTAGACATGAAATCAAGTGGCGTAAGAGTATTGGGATTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTTGCAAAGGCTCTTTTTAACAGAGGCCTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGACAAGTTTCTTCCGAAGATGGAGGTTTAATTTCTCTAAGAAACAGAATTATCAGTGACATTTCCTCTCAAGCAGTTGTTGGTGATGATATATCTGCTTTCAGAAGAACAGTTAATGAACATCGTGTTCTGATAATCCTGGATGATGTGGATGATCCGAAGCAGCTCGATGCTCTAATAGGAAAAAGAGAATGGTTCCATGAAGACAGCCGTATTGTAGTCACCTCAAGGGATAAACGAGCTTTGCCTGAGACTCATGTTAATGTACCCTACGAGGTTCAGATATTGGATGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGATAAAACTCTTTTGAAATTGTCAAAGGAAATAGTGTCTCTAACAGGAAGATTGCCTTTAGCTGTGGAAGTGTTTGGTTCGTTGTTGTTTGGTAAGACAAGACACGAGGAATGGGTTGATGCTGTGGAGAAACTGAAGGTGATTCGACCTGGGAATCTTCAGGAAGTGTTGAAGATAAGTTATGAGGGGTTAGATGAACAAGAGAAATGCATCTTCCTCGACATAGCTTGTCTGTTCGTTCAGATGAGGATGAAGCGAGAAGATGTGATTGATGTACTTAGAGGTTGTAGATATGGGGGAGAGATAGCAATCACAGTTCTCACAGAGAAATGCTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATTGTTGTGGAAGAAAACCTCGTTGATCCTGATATGCGTAGTAGATTGTGGGATAGATCTGAAATTCTAGCTGTTTTGAGGAATTTGAAGGGAACTCGGAGTATTCAAGGGATGGTACTAGACTTCGAGAAAAAATCTACTAAAGATAACGGAGAAGCAATTTCTTGGATCAATCTTAAATGTGGTTTCAGTTTTAAGAATGCCCTGGCATTCCTTAAACATATGCACGAGAAATATTTTCAACGAGTTGAGAAAGACAAAGAGGTTGCAGTGCTTCAAACCAAGTCCTTTGAATCCATGGTGAACTTGGTGCTGCTTCAGATCAATAATTTGAGATTGGAAGGGAAGTTTAAATCTTTCCCTGCAGAATTGAAGTGGCTACGATGGCAAGGGTGTCCTTTAAAATCCATGCCTTCTGATTTTTGGCCACGAGAACTGGCTGTCCTTGATCTCACACACAGCTATATTGAGAATTTGTGGAATCGGAAAGGCGACAAGGTGCCTGAAAACCTCTTGGCCATGAACCTCTCCGACTGCTACCACCTGGAGACTCTTCCTGATCTGTCTGGATGCCAACGTTTAGAGAAGATTGTTCTAGTGAACTGCATTAAACTGAGTAGGATTCATGAATCACTTGGCAATCTGATCACACTTCGTCATTTGAATCTGACTCGTTGTAGAGAACTTACTGAGTTACCCAATGATATATCTGGGCTGAAAAATCTAGAGAGCCTCTATCTCTCTGACTGCTACAAGTTCAAATCGTTACCAAGGAACATGGCCAACTTGAAATCTCTAAGAAAGCTTCTTGCTAATGGCACAGCTTTAGCAGAGCTGCCCGAGACTATTTTTCGCCTTGAGAAACTTGAAATTCTTATTTTAAATGATTGCCAAAACTTAAAAAGACTACCCAACAACATCGGACTTTTGTGTTCTCTGCAAGAACTTTCTATTAACCAATCTGGATTAGAAGAACTACCCAATTCTATTGGGTGTTTGAAGAACCTTGAGAAGCTTGGCTTGATGCATTGCTTTTCTCTCACTGAGATTCCCGATTCTATTGGAAACCTTGATTCACTTTCAGAGCTCATGCTTTCTGGCAGTGGTATTAGAGAGCTTCCTTCTTCGATTGGATCATTGTCTTATCTAAATGAACTCTGTGTAGGACACTGTAAGTCTCTGAAAAAATTGCCTGAGTCTATTAAGCTTTTGGCTTCCGTTGTTGAGCTTCAGCTAGATGGGACAGCGATCACAGATTTGCCAGATGAGATTGGAGATATGGAGTTGCTGAAAAAGCTTGAAATGAGGAATTGCCTGATGAGATCTCTACCCGAATCGATTGGACGCCTCACAGCACTTACATCCTTGGACATTTCCAATGGAAACATAGAAGAATTGCCGGAGTCCATCAAGGAGATAAAAAATCTTGTTCATTTAAGGTTGGACAAATGCAAAATGCTCAGAAAGCTTCCTGATTCTATAGGATATTTGAAGTCCTTGTATCATTTTGGGATGGAGGAAACGGGTCTGACAGAATTACCTGAAAGCTTTGGTATGCTTACCAACTTAAGGACGTTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCAGGAATCTTCTGTAATCTCATTTTTTTTCTGCAATATGATATTTCTGAATGACCTGGACGCTCGTTGTTGGAGAATATCTGGAAAAATTCCTGATGAATTTGGGAACTTGTCGTATTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCTGGCCTTTCGTTTCTCAAAAAACTCACTCTTCAAAACTGCATTGAGCTGGTTTCTCTCCCTGCTCTTCCATCAAGCTTGATAGAGCTGAATGCTGCAAACTGTTGCACCTTACAAAGCATTCATGACCTTTCAAATTTAACGAGTTTGAAGGATCTAAACCTCACAAATTGTGTAAAAGTATTGGATATTCCAGGCCTTGAACGGTTGGAGTCTTTGAGGAGTTTGTACTTGGGTGGATGCATTGCTTGCTCCTCCACAATCCGCAAGAGATTTTCTAAGGTTACAATGAGGAATTTAAGGAACTTGATCATGCCAGGAACCAGAATACCCAGATGGTTTTCAGGACAAGCTGTAAGCTTTTCGAAGCCCCAGAACCGTAACCTAACTGGTGTAATTATAGGTATCATTCTTTCTATCAACCTTGATACACCTAATGATGAGCTGCGAGATGATCAACTTCCAGGAGGAGTTGATATTAGAGCAAATGTCCTCAAACTGGGCAAAACTATAGATAGTGCAGTGTTGGACTTGCGTGGGTTGCCAAGAACGAATGATGAACACATATACTTTTGTAGATTCCCAGATTATCATCATCTCATATCTTGCTTGCGAGATAATGGGGACACATTTTTTGTGACTAAGAAAAACCCACCATTGGATAAGAGATTAGAGCTGAAGAAATGTGGGGTTCATTTGATGTTTGAAGGAGATGATGACGATTATGATGGAGATGAAGAATCAGTAGATAGAGGCCTACAATCTGTGTCAGAAAAGCTGGCCAAGTTTTTCAACACTAACGAAGAAGGTAGCCTCATAGGTGATATTGAGAGTGAAGATGAAGAGAGAATATCATCGTCGAAGTGGATCATCTCCTGTTTCTAG 4155 0.4185 MSPDGHVVLSTPGAFRLRWDVFLSFRGTDTRDCLTKPLYNSLESRGIRVFLDDVGLDRGDQIAPSLLEAIDDSAASIVIISPDYASSHWCLEELAKICDCGRLILPVFYRVSPTDVLEQAGPFEDSFKVHKAKRSDDEVIRWRKAMKKVGGIAGWVFQNPSEEDNLIRLLVQRILKELSNTPVGLAEFTVGLNARIEKLLELLDMKSSGVRVLGLYGMGGVGKTTLAKALFNRGLVHFEHRSFISSVRQVSSEDGGLISLRNRIISDISSQAVVGDDISAFRRTVNEHRVLIILDDVDDPKQLDALIGKREWFHEDSRIVVTSRDKRALPETHVNVPYEVQILDDSDSLELFCYHAMRRKEPADKTLLKLSKEIVSLTGRLPLAVEVFGSLLFGKTRHEEWVDAVEKLKVIRPGNLQEVLKISYEGLDEQEKCIFLDIACLFVQMRMKREDVIDVLRGCRYGGEIAITVLTEKCLIKIREDETIWMHDQIRDMGRQIVVEENLVDPDMRSRLWDRSEILAVLRNLKGTRSIQGMVLDFEKKSTKDNGEAISWINLKCGFSFKNALAFLKHMHEKYFQRVEKDKEVAVLQTKSFESMVNLVLLQINNLRLEGKFKSFPAELKWLRWQGCPLKSMPSDFWPRELAVLDLTHSYIENLWNRKGDKVPENLLAMNLSDCYHLETLPDLSGCQRLEKIVLVNCIKLSRIHESLGNLITLRHLNLTRCRELTELPNDISGLKNLESLYLSDCYKFKSLPRNMANLKSLRKLLANGTALAELPETIFRLEKLEILILNDCQNLKRLPNNIGLLCSLQELSINQSGLEELPNSIGCLKNLEKLGLMHCFSLTEIPDSIGNLDSLSELMLSGSGIRELPSSIGSLSYLNELCVGHCKSLKKLPESIKLLASVVELQLDGTAITDLPDEIGDMELLKKLEMRNCLMRSLPESIGRLTALTSLDISNGNIEELPESIKEIKNLVHLRLDKCKMLRKLPDSIGYLKSLYHFGMEETGLTELPESFGMLTNLRTLKMANKSENNLLQESSVISFFFCNMIFLNDLDARCWRISGKIPDEFGNLSYLETLNLSQNKFHSLPSSLAGLSFLKKLTLQNCIELVSLPALPSSLIELNAANCCTLQSIHDLSNLTSLKDLNLTNCVKVLDIPGLERLESLRSLYLGGCIACSSTIRKRFSKVTMRNLRNLIMPGTRIPRWFSGQAVSFSKPQNRNLTGVIIGIILSINLDTPNDELRDDQLPGGVDIRANVLKLGKTIDSAVLDLRGLPRTNDEHIYFCRFPDYHHLISCLRDNGDTFFVTKKNPPLDKRLELKKCGVHLMFEGDDDDYDGDEESVDRGLQSVSEKLAKFFNTNEEGSLIGDIESEDEERISSSKWIISCF 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1164 1384 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Lele52g1164 1384 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 801 IPR044974 GO:0006952
Lele52g1164 1384 PRINTS Disease resistance protein signature 780 796 - -
Lele52g1164 1384 PRINTS Disease resistance protein signature 284 298 - -
Lele52g1164 1384 PRINTS Disease resistance protein signature 378 392 - -
Lele52g1164 1384 PRINTS Disease resistance protein signature 212 227 - -
Lele52g1164 1384 Gene3D Ribonuclease Inhibitor 840 983 IPR032675 -
Lele52g1164 1384 Gene3D Ribonuclease Inhibitor 984 1116 IPR032675 -
Lele52g1164 1384 Gene3D - 17 178 IPR035897 -
Lele52g1164 1384 ProSiteProfiles Leucine-rich repeat profile. 1072 1094 IPR001611 GO:0005515
Lele52g1164 1384 SUPERFAMILY L domain-like 890 1200 - -
Lele52g1164 1384 Gene3D - 179 337 IPR027417 -
Lele52g1164 1384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 438 IPR027417 -
Lele52g1164 1384 ProSiteProfiles TIR domain profile. 17 182 IPR000157 GO:0007165
Lele52g1164 1384 Gene3D Ribonuclease Inhibitor 559 839 IPR032675 -
Lele52g1164 1384 SMART till_3 18 152 IPR000157 GO:0007165
Lele52g1164 1384 Gene3D - 342 428 IPR042197 -
Lele52g1164 1384 Gene3D Ribonuclease Inhibitor 1117 1203 IPR032675 -
Lele52g1164 1384 SMART LRR_bac_2 1093 1113 - -
Lele52g1164 1384 SMART LRR_bac_2 1070 1089 - -
Lele52g1164 1384 SMART LRR_bac_2 876 896 - -
Lele52g1164 1384 SMART LRR_bac_2 946 965 - -
Lele52g1164 1384 SMART LRR_bac_2 759 778 - -
Lele52g1164 1384 SMART LRR_bac_2 664 684 - -
Lele52g1164 1384 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Lele52g1164 1384 SUPERFAMILY L domain-like 485 917 - -
Lele52g1164 1384 SMART LRR_typ_2 853 876 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 711 735 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 946 968 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 900 923 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 806 829 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 1070 1093 IPR003591 -
Lele52g1164 1384 SMART LRR_typ_2 759 782 IPR003591 -
Lele52g1164 1384 Pfam NB-ARC domain 195 414 IPR002182 GO:0043531
Lele52g1164 1384 Pfam TIR domain 19 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1164 Lele-ChrLele52 8134605 8145413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1164 102 882 WRKY Transcription Factor Family AT4G12020 30.235 9.57e-75 273