Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1162 ATGGCTTTTTCTTCTTCTTCCTCCACCTCCTTCTCCTCCTCCAATGTGAAGCCATGGCTTTGTTTAAGCTTTCTCTTCGTTCTTCAAACTTCTCTCCTTGCACCAATTTGTAATTGTCAACCTCAGAACATCGAAACCTTCTTTCCAACTGAAACTCCACCCACAGCTCCTCCACCGAGCATTTCTTCATCGCCGTCGGTTGTCCCCGTGCCGGCGCCGGCGGAAACAACCAGAAGTTCTTCATCATCGAATAGTAAGATAGGGAAGGCGGTGGCGATTACTGCAGCAAGCACTGTGGTTGTTTCTGCGTTACTCTTCTTCTTTATACGATGGTGTTTAAAGAAAAGACGCAGAGAAGAGAGACGTGTGAGCTCGGCTTCGGAACCTGGTGACGGACATGGAAGAGACGTTGTAACTCAGACGAACACGTTTGAGAGAATTGAAGGGAATGTGAAGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGGGAGCTTCAAGAGAAGAAGAAGAAGAATAGCTCCAAGATGGGATTACAGAGAGAGGTTCGAACCATCGCTAAAGAACAAGATCAGCAAGAACAAGAAGTAGAAGAAGAAGTTGACGATGATGGTGATAATGAAGGAAATCATCGCCGGAAAAAACCTGAGCCTGTTCAAGAAATCCCTCTGCTTCGTGGCAAGTTTTCGGCTTCCGAGAAGAATTTAATAGCAGAAGATGAACATGGGTCGGGTCGGAGTTGGAGTTGGAGGAGAACGTTTTCTCGAAAAACAGCTCCTAATCCTCCTCCTCCTGTGACCACGGCGGCAACGACTGTTTCACCGCCATTACCACCACCACCTGCCGCTTATTTTTCTGCTGTTTCAAAAGCGAAAAACGTGGAACCGCCGCCGCCGCCTCATGTTACGGCTGCTTCTTCTTCTTCGGTTTCACCACCATTGCCGCCGCCACCCTCTGCTTACTTTTCTTCTGTTAACAAAGCGAAAAGCAGTGAACCACCACCTCCTCCTCTGTCAATTCCAGATAAGAAGGGTCCGGCGCCGCCTCCCCCGCCTCCACCTGTGCCAGCTAAAAAGAGTCCTGCAGCACCACCACCCGCTCCTCCCATGGCCGGAAAAAACTTGAGGTCATCTTCAAAACCACCACCAACCCCAGTTGAAATTTCAGGGGAAGACAATGATAAAGTGAAACTCAAGCCTTTACATTGGGATAAAGTCACCACTAACGTTGATCATTCCATGGTTTGGGACAAACTGGATCGTGGCTCATTCAGGGTTGATCAAGATCTTATGGAAGCTCTTTTTGGATATGTGGCAACAAGCAAAAGAACACCAAGAGGGAAAGACAATTCAACTAGTCCAACCAAGGAGGCATCTTCTGCAGCACAATCAAGCACAACTTTCATTCTTGAATCCAGGAAATCACAGAACATTGCTATTGTTTTGAGATCTCTAGCCGTGTCTCGCCGGGAAATCCTCGACGCCCTCGACGAGGGCCACGGCCTAAATTCGGATATAATTGAGAAGCTTGTTAGAGTTGCTCCAACACAAGAAGAACAATCTGAAATCATTGATTATAATGGAGACCCTGCAAAACTTGCTGTTGCAGAATCCTTCCTTTATGACATTCTCAAAGCTGTTCCTTCAGCTTTCAAGCGTTTGAATGCTATGCTTTTCAGGTTCAACTATGATTCAGAGATATTAGAGATCAAGGAATCTATGAACACCCTTGAATTAGGCTGCAAGGAGCTTCGAAATCGAGGGCTTTTCATTAAACTCCTCGAAGCGGTTCTTAAGGCCGGGAACCGTATGAATGCTGGTACTTCAAGAGGCAATGCTCAAGCTTTCAACCTGACTTCTTTGAGGAAGCTCTCTGATGTCAAAAGCACAGATGGGAAAACCACATTGCTTCACTTTGTGGTCGAAGAAGTAGTCCGATCCGAGGGAAAGCGGTGCGTTCTTAACCGCGATCGAAGCCTGAATCGCAGTGGAAGTAGTATTAGGAGGAGGAGAATGAACTCTCAGGATGAGAACGTTGTTTCAGATGAACAGAGAGAAATGGAATACCTAAAGCTAGGGTTACCATTTGTTGGAGGAATCAGCGCTGAGTTCTCCAATGTGAAGAAATCCGCCATTATAGACTACAATAGTTTAGTTTCTTCAATCTCATCACTTTCAACTCGGATAGCAGAAATCAAACAACTTGTTTCAAAGTGTGGTGAGAATGGTAATAATAAAGTAGGGAACTTTGCGAGAGAAATGGAGCATTTTCTGAGAAATGCAGAGGAAGAATTGAGATCAGTGAGAGATGAACAAACAAGGGTAATGCAGATTGTGAAGAAAACAACAGAGTATTATCAAGGAGGAGCTTTTAAAGATAAAGCAGAGAATCTTCTGGAAATATTTGTCATTGTTAAGGATTTTCTGGGTATGGTTGATCAGGCTTGTATTGATATTGCTCGTAGTATGCAGAAGAAAAAGAAGACAACAAAATCAAATTCTGGGTAA 2517 0.4482 MAFSSSSSTSFSSSNVKPWLCLSFLFVLQTSLLAPICNCQPQNIETFFPTETPPTAPPPSISSSPSVVPVPAPAETTRSSSSSNSKIGKAVAITAASTVVVSALLFFFIRWCLKKRRREERRVSSASEPGDGHGRDVVTQTNTFERIEGNVKGLIVDENGLDVIYWRELQEKKKKNSSKMGLQREVRTIAKEQDQQEQEVEEEVDDDGDNEGNHRRKKPEPVQEIPLLRGKFSASEKNLIAEDEHGSGRSWSWRRTFSRKTAPNPPPPVTTAATTVSPPLPPPPAAYFSAVSKAKNVEPPPPPHVTAASSSSVSPPLPPPPSAYFSSVNKAKSSEPPPPPLSIPDKKGPAPPPPPPPVPAKKSPAAPPPAPPMAGKNLRSSSKPPPTPVEISGEDNDKVKLKPLHWDKVTTNVDHSMVWDKLDRGSFRVDQDLMEALFGYVATSKRTPRGKDNSTSPTKEASSAAQSSTTFILESRKSQNIAIVLRSLAVSRREILDALDEGHGLNSDIIEKLVRVAPTQEEQSEIIDYNGDPAKLAVAESFLYDILKAVPSAFKRLNAMLFRFNYDSEILEIKESMNTLELGCKELRNRGLFIKLLEAVLKAGNRMNAGTSRGNAQAFNLTSLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVLNRDRSLNRSGSSIRRRRMNSQDENVVSDEQREMEYLKLGLPFVGGISAEFSNVKKSAIIDYNSLVSSISSLSTRIAEIKQLVSKCGENGNNKVGNFAREMEHFLRNAEEELRSVRDEQTRVMQIVKKTTEYYQGGAFKDKAENLLEIFVIVKDFLGMVDQACIDIARSMQKKKKTTKSNSG 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1162 838 Coils Coil 179 199 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 49 83 - -
Lele52g1162 838 PANTHER FORMIN-RELATED 314 826 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele52g1162 838 MobiDBLite consensus disorder prediction 447 469 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 67 83 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 176 396 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 176 195 - -
Lele52g1162 838 Gene3D Formin, FH2 domain 412 837 IPR042201 -
Lele52g1162 838 MobiDBLite consensus disorder prediction 51 66 - -
Lele52g1162 838 Coils Coil 754 781 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 236 250 - -
Lele52g1162 838 ProSiteProfiles Formin homology-2 (FH2) domain profile. 391 838 IPR015425 -
Lele52g1162 838 MobiDBLite consensus disorder prediction 209 224 - -
Lele52g1162 838 Pfam Formin Homology 2 Domain 395 815 IPR015425 -
Lele52g1162 838 SMART it6_source 391 830 IPR015425 -
Lele52g1162 838 MobiDBLite consensus disorder prediction 261 286 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 333 374 - -
Lele52g1162 838 SUPERFAMILY Formin homology 2 domain (FH2 domain) 469 834 - -
Lele52g1162 838 MobiDBLite consensus disorder prediction 445 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1162 Lele-ChrLele52 8114510 8117110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1162 380 830 FH2 protein (formin) Gene Family AT1G70140 56.608 1.29e-170 510